Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.12□□□□□ -0.15
Stx1aO35526 Gm37917-201ENSMUST00000194711 392 ntBASIC14.12□□□□□ -0.15
Stx1aO35526 AC098716.1-201ENSMUST00000213527 703 ntBASIC14.12□□□□□ -0.15
Stx1aO35526 Gm18624-201ENSMUST00000220966 658 ntBASIC14.12□□□□□ -0.15
Stx1aO35526 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.12□□□□□ -0.15
Stx1aO35526 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Stx1aO35526 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Stx1aO35526 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Stx1aO35526 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Stx1aO35526 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Stx1aO35526 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC14.12□□□□□ -0.15
Stx1aO35526 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Stx1aO35526 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Stx1aO35526 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC14.12□□□□□ -0.15
Stx1aO35526 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Stx1aO35526 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Stx1aO35526 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Stx1aO35526 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Stx1aO35526 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Stx1aO35526 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Stx1aO35526 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Stx1aO35526 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Stx1aO35526 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Stx1aO35526 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Stx1aO35526 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Stx1aO35526 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Stx1aO35526 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Stx1aO35526 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Stx1aO35526 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Stx1aO35526 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Stx1aO35526 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Stx1aO35526 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Stx1aO35526 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Stx1aO35526 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Stx1aO35526 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC14.11□□□□□ -0.15
Stx1aO35526 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Stx1aO35526 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Stx1aO35526 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Stx1aO35526 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Stx1aO35526 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Stx1aO35526 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Stx1aO35526 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Stx1aO35526 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Stx1aO35526 Gm12928-201ENSMUST00000117115 573 ntBASIC14.11□□□□□ -0.15
Stx1aO35526 Gm14132-201ENSMUST00000117188 1719 ntBASIC14.11□□□□□ -0.15
Stx1aO35526 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Stx1aO35526 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14.11□□□□□ -0.15
Stx1aO35526 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.11□□□□□ -0.15
Stx1aO35526 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.11□□□□□ -0.15
Stx1aO35526 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Stx1aO35526 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC14.11□□□□□ -0.15
Stx1aO35526 AC165260.3-202ENSMUST00000224550 1031 ntBASIC14.11□□□□□ -0.15
Stx1aO35526 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.11□□□□□ -0.15
Stx1aO35526 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Stx1aO35526 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.11□□□□□ -0.15
Stx1aO35526 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Stx1aO35526 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Stx1aO35526 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Stx1aO35526 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Stx1aO35526 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Stx1aO35526 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Stx1aO35526 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Stx1aO35526 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Stx1aO35526 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Stx1aO35526 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Stx1aO35526 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Stx1aO35526 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Stx1aO35526 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC14.11□□□□□ -0.15
Stx1aO35526 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Stx1aO35526 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Stx1aO35526 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Stx1aO35526 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Stx1aO35526 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Stx1aO35526 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Stx1aO35526 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Stx1aO35526 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Stx1aO35526 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Stx1aO35526 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Stx1aO35526 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Stx1aO35526 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Stx1aO35526 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC14.1□□□□□ -0.15
Stx1aO35526 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Stx1aO35526 Gm8805-201ENSMUST00000117848 313 ntBASIC14.1□□□□□ -0.15
Stx1aO35526 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.1□□□□□ -0.15
Stx1aO35526 Gm6652-201ENSMUST00000186414 1070 ntBASIC14.1□□□□□ -0.15
Stx1aO35526 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.1□□□□□ -0.15
Stx1aO35526 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.1□□□□□ -0.15
Stx1aO35526 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Stx1aO35526 Gm44772-201ENSMUST00000207623 1191 ntBASIC14.1□□□□□ -0.15
Stx1aO35526 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.1□□□□□ -0.15
Stx1aO35526 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.1□□□□□ -0.15
Stx1aO35526 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.1□□□□□ -0.15
Stx1aO35526 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.1□□□□□ -0.15
Stx1aO35526 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Stx1aO35526 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Stx1aO35526 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.1□□□□□ -0.15
Stx1aO35526 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Stx1aO35526 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Stx1aO35526 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Stx1aO35526 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms