Protein–RNA interactions for Protein: O08738

Casp6, Caspase-6, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp6O08738 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Casp6O08738 Gm19187-201ENSMUST00000206781 892 ntBASIC10.8□□□□□ -0.68
Casp6O08738 Gm8913-201ENSMUST00000209491 641 ntBASIC10.8□□□□□ -0.68
Casp6O08738 Gm45598-202ENSMUST00000210719 986 ntBASIC10.8□□□□□ -0.68
Casp6O08738 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Casp6O08738 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Casp6O08738 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Casp6O08738 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Casp6O08738 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Casp6O08738 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Casp6O08738 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Casp6O08738 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Casp6O08738 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Casp6O08738 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Casp6O08738 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
Casp6O08738 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Casp6O08738 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Casp6O08738 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Casp6O08738 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Casp6O08738 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC10.8□□□□□ -0.68
Casp6O08738 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Casp6O08738 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Casp6O08738 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Casp6O08738 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Casp6O08738 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Casp6O08738 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Casp6O08738 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC10.79□□□□□ -0.68
Casp6O08738 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Casp6O08738 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC10.79□□□□□ -0.68
Casp6O08738 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Casp6O08738 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.79□□□□□ -0.68
Casp6O08738 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Casp6O08738 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC10.79□□□□□ -0.68
Casp6O08738 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Casp6O08738 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Casp6O08738 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Casp6O08738 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Casp6O08738 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Casp6O08738 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Casp6O08738 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Casp6O08738 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Casp6O08738 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Casp6O08738 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Casp6O08738 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Casp6O08738 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Casp6O08738 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Casp6O08738 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Casp6O08738 Gm16481-201ENSMUST00000119074 1227 ntBASIC10.79□□□□□ -0.68
Casp6O08738 Gm5863-201ENSMUST00000121760 1008 ntBASIC10.79□□□□□ -0.68
Casp6O08738 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Casp6O08738 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Casp6O08738 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Casp6O08738 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC10.79□□□□□ -0.68
Casp6O08738 Gm17040-202ENSMUST00000170597 889 ntBASIC10.79□□□□□ -0.68
Casp6O08738 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC10.79□□□□□ -0.68
Casp6O08738 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Casp6O08738 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Casp6O08738 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Casp6O08738 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC10.79□□□□□ -0.68
Casp6O08738 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC10.79□□□□□ -0.68
Casp6O08738 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Casp6O08738 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC10.79□□□□□ -0.68
Casp6O08738 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Casp6O08738 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Casp6O08738 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Casp6O08738 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC10.79□□□□□ -0.68
Casp6O08738 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Casp6O08738 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Casp6O08738 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Casp6O08738 Gm12626-201ENSMUST00000117339 1983 ntBASIC10.79□□□□□ -0.68
Casp6O08738 Gm12623-201ENSMUST00000119849 1983 ntBASIC10.79□□□□□ -0.68
Casp6O08738 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Casp6O08738 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Casp6O08738 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Casp6O08738 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Casp6O08738 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Casp6O08738 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Casp6O08738 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Casp6O08738 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Casp6O08738 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Casp6O08738 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Casp6O08738 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Casp6O08738 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Casp6O08738 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC10.78□□□□□ -0.68
Casp6O08738 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC10.78□□□□□ -0.68
Casp6O08738 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Casp6O08738 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Casp6O08738 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Casp6O08738 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Casp6O08738 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Casp6O08738 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
Casp6O08738 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Casp6O08738 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Casp6O08738 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Casp6O08738 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Casp6O08738 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC10.78□□□□□ -0.68
Casp6O08738 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Casp6O08738 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Casp6O08738 AC167013.2-201ENSMUST00000228520 2684 ntBASIC10.78□□□□□ -0.68
Casp6O08738 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms