Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcf11G3X9Z4 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcf11G3X9Z4 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcf11G3X9Z4 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcf11G3X9Z4 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcf11G3X9Z4 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Pcf11G3X9Z4 Gm5714-201ENSMUST00000197343 566 ntBASIC18.73■□□□□ 0.59
Pcf11G3X9Z4 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC18.73■□□□□ 0.59
Pcf11G3X9Z4 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Pcf11G3X9Z4 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
Pcf11G3X9Z4 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Pcf11G3X9Z4 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcf11G3X9Z4 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcf11G3X9Z4 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Pcf11G3X9Z4 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcf11G3X9Z4 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcf11G3X9Z4 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcf11G3X9Z4 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC18.73■□□□□ 0.59
Pcf11G3X9Z4 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcf11G3X9Z4 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcf11G3X9Z4 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcf11G3X9Z4 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.73■□□□□ 0.59
Pcf11G3X9Z4 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcf11G3X9Z4 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Pcf11G3X9Z4 AC116503.1-201ENSMUST00000215445 2192 ntBASIC18.73■□□□□ 0.59
Pcf11G3X9Z4 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcf11G3X9Z4 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcf11G3X9Z4 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcf11G3X9Z4 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
Pcf11G3X9Z4 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
Pcf11G3X9Z4 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC18.72■□□□□ 0.59
Pcf11G3X9Z4 Gm13263-201ENSMUST00000121271 838 ntBASIC18.72■□□□□ 0.59
Pcf11G3X9Z4 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC18.72■□□□□ 0.59
Pcf11G3X9Z4 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC18.72■□□□□ 0.59
Pcf11G3X9Z4 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcf11G3X9Z4 Mir8115-201ENSMUST00000184992 119 ntBASIC18.72■□□□□ 0.59
Pcf11G3X9Z4 Ighv1-48-201ENSMUST00000191795 294 ntBASIC18.72■□□□□ 0.59
Pcf11G3X9Z4 Gm44980-201ENSMUST00000205826 314 ntBASIC18.72■□□□□ 0.59
Pcf11G3X9Z4 Gm45575-201ENSMUST00000210283 548 ntBASIC18.72■□□□□ 0.59
Pcf11G3X9Z4 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC18.72■□□□□ 0.59
Pcf11G3X9Z4 AC153505.1-201ENSMUST00000218819 1071 ntBASIC18.72■□□□□ 0.59
Pcf11G3X9Z4 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcf11G3X9Z4 Gm43267-201ENSMUST00000199664 1796 ntBASIC18.72■□□□□ 0.59
Pcf11G3X9Z4 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcf11G3X9Z4 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcf11G3X9Z4 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC18.72■□□□□ 0.59
Pcf11G3X9Z4 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcf11G3X9Z4 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcf11G3X9Z4 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcf11G3X9Z4 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcf11G3X9Z4 AC173482.6-201ENSMUST00000225889 1741 ntBASIC18.72■□□□□ 0.59
Pcf11G3X9Z4 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcf11G3X9Z4 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Pcf11G3X9Z4 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcf11G3X9Z4 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcf11G3X9Z4 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcf11G3X9Z4 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcf11G3X9Z4 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcf11G3X9Z4 Gm43807-201ENSMUST00000200678 1781 ntBASIC18.72■□□□□ 0.59
Pcf11G3X9Z4 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Pcf11G3X9Z4 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcf11G3X9Z4 Gm15881-201ENSMUST00000148792 942 ntBASIC18.72■□□□□ 0.59
Pcf11G3X9Z4 AC141438.2-201ENSMUST00000215068 271 ntBASIC18.72■□□□□ 0.59
Pcf11G3X9Z4 AC135114.1-201ENSMUST00000228682 270 ntBASIC18.72■□□□□ 0.59
Pcf11G3X9Z4 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcf11G3X9Z4 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcf11G3X9Z4 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcf11G3X9Z4 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcf11G3X9Z4 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Pcf11G3X9Z4 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcf11G3X9Z4 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcf11G3X9Z4 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcf11G3X9Z4 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcf11G3X9Z4 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcf11G3X9Z4 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcf11G3X9Z4 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcf11G3X9Z4 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcf11G3X9Z4 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC18.71■□□□□ 0.59
Pcf11G3X9Z4 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC18.71■□□□□ 0.59
Pcf11G3X9Z4 Gm9630-201ENSMUST00000178304 885 ntBASIC18.71■□□□□ 0.59
Pcf11G3X9Z4 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC18.71■□□□□ 0.59
Pcf11G3X9Z4 Gm19287-201ENSMUST00000203190 358 ntBASIC18.71■□□□□ 0.59
Pcf11G3X9Z4 Gm45219-201ENSMUST00000205602 465 ntBASIC18.71■□□□□ 0.59
Pcf11G3X9Z4 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcf11G3X9Z4 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcf11G3X9Z4 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcf11G3X9Z4 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcf11G3X9Z4 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcf11G3X9Z4 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Pcf11G3X9Z4 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcf11G3X9Z4 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
Pcf11G3X9Z4 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Pcf11G3X9Z4 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcf11G3X9Z4 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcf11G3X9Z4 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcf11G3X9Z4 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcf11G3X9Z4 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcf11G3X9Z4 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcf11G3X9Z4 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Pcf11G3X9Z4 Gm6189-201ENSMUST00000164487 2082 ntBASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms