Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm17889-201ENSMUST00000198410 598 ntBASIC15.14■□□□□ 0.01
NpcdF8VQB8 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NpcdF8VQB8 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC15.14■□□□□ 0.01
NpcdF8VQB8 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NpcdF8VQB8 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NpcdF8VQB8 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NpcdF8VQB8 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NpcdF8VQB8 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NpcdF8VQB8 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NpcdF8VQB8 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NpcdF8VQB8 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NpcdF8VQB8 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC15.14■□□□□ 0.01
NpcdF8VQB8 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NpcdF8VQB8 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
NpcdF8VQB8 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC15.14■□□□□ 0.01
NpcdF8VQB8 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC15.14■□□□□ 0.01
NpcdF8VQB8 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NpcdF8VQB8 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NpcdF8VQB8 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NpcdF8VQB8 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NpcdF8VQB8 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NpcdF8VQB8 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NpcdF8VQB8 Gm7851-201ENSMUST00000117574 323 ntBASIC15.13■□□□□ 0.01
NpcdF8VQB8 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NpcdF8VQB8 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC15.13■□□□□ 0.01
NpcdF8VQB8 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NpcdF8VQB8 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NpcdF8VQB8 Gm34023-201ENSMUST00000195539 217 ntBASIC15.13■□□□□ 0.01
NpcdF8VQB8 Gm19166-201ENSMUST00000196041 1063 ntBASIC15.13■□□□□ 0.01
NpcdF8VQB8 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
NpcdF8VQB8 Gm9463-201ENSMUST00000206707 601 ntBASIC15.13■□□□□ 0.01
NpcdF8VQB8 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC15.13■□□□□ 0.01
NpcdF8VQB8 Gm3028-201ENSMUST00000213805 1119 ntBASIC15.13■□□□□ 0.01
NpcdF8VQB8 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NpcdF8VQB8 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NpcdF8VQB8 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NpcdF8VQB8 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NpcdF8VQB8 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
NpcdF8VQB8 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NpcdF8VQB8 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NpcdF8VQB8 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NpcdF8VQB8 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NpcdF8VQB8 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NpcdF8VQB8 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
NpcdF8VQB8 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
NpcdF8VQB8 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NpcdF8VQB8 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
NpcdF8VQB8 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NpcdF8VQB8 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC15.12■□□□□ 0.01
NpcdF8VQB8 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NpcdF8VQB8 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NpcdF8VQB8 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
NpcdF8VQB8 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NpcdF8VQB8 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
NpcdF8VQB8 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NpcdF8VQB8 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NpcdF8VQB8 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
NpcdF8VQB8 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NpcdF8VQB8 Gm12501-201ENSMUST00000119163 529 ntBASIC15.12■□□□□ 0.01
NpcdF8VQB8 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC15.12■□□□□ 0.01
NpcdF8VQB8 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
NpcdF8VQB8 Gm25072-201ENSMUST00000175233 235 ntBASIC15.12■□□□□ 0.01
NpcdF8VQB8 Gm3671-201ENSMUST00000182463 1007 ntBASIC15.12■□□□□ 0.01
NpcdF8VQB8 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NpcdF8VQB8 Gm4482-201ENSMUST00000200876 742 ntBASIC15.12■□□□□ 0.01
NpcdF8VQB8 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC15.12■□□□□ 0.01
NpcdF8VQB8 Gm18974-201ENSMUST00000221478 1031 ntBASIC15.12■□□□□ 0.01
NpcdF8VQB8 AC154176.1-201ENSMUST00000225897 220 ntBASIC15.12■□□□□ 0.01
NpcdF8VQB8 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NpcdF8VQB8 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NpcdF8VQB8 Gm25517-201ENSMUST00000083865 134 ntBASIC15.12■□□□□ 0.01
NpcdF8VQB8 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
NpcdF8VQB8 Gm42928-201ENSMUST00000197338 3339 ntBASIC15.12■□□□□ 0.01
NpcdF8VQB8 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NpcdF8VQB8 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NpcdF8VQB8 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
NpcdF8VQB8 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
NpcdF8VQB8 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NpcdF8VQB8 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NpcdF8VQB8 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NpcdF8VQB8 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC15.12■□□□□ 0.01
NpcdF8VQB8 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NpcdF8VQB8 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NpcdF8VQB8 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
NpcdF8VQB8 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC15.12■□□□□ 0.01
NpcdF8VQB8 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NpcdF8VQB8 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
NpcdF8VQB8 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NpcdF8VQB8 Gm38346-201ENSMUST00000192379 2639 ntBASIC15.12■□□□□ 0.01
NpcdF8VQB8 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NpcdF8VQB8 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NpcdF8VQB8 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NpcdF8VQB8 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
NpcdF8VQB8 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NpcdF8VQB8 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NpcdF8VQB8 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
NpcdF8VQB8 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NpcdF8VQB8 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NpcdF8VQB8 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NpcdF8VQB8 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms