Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Colca2F8VPY8 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Colca2F8VPY8 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Colca2F8VPY8 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Colca2F8VPY8 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Colca2F8VPY8 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC11.83□□□□□ -0.52
Colca2F8VPY8 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Colca2F8VPY8 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Colca2F8VPY8 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Colca2F8VPY8 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Colca2F8VPY8 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Colca2F8VPY8 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Colca2F8VPY8 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Colca2F8VPY8 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Colca2F8VPY8 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Colca2F8VPY8 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Colca2F8VPY8 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Colca2F8VPY8 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Colca2F8VPY8 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Colca2F8VPY8 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Colca2F8VPY8 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Colca2F8VPY8 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Colca2F8VPY8 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Colca2F8VPY8 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Colca2F8VPY8 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Colca2F8VPY8 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Colca2F8VPY8 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Colca2F8VPY8 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Colca2F8VPY8 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Colca2F8VPY8 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Colca2F8VPY8 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Colca2F8VPY8 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC11.82□□□□□ -0.52
Colca2F8VPY8 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC11.82□□□□□ -0.52
Colca2F8VPY8 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Colca2F8VPY8 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.82□□□□□ -0.52
Colca2F8VPY8 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Colca2F8VPY8 Mir1956-201ENSMUST00000157748 65 ntBASIC11.82□□□□□ -0.52
Colca2F8VPY8 Gm6485-201ENSMUST00000160676 439 ntBASIC11.82□□□□□ -0.52
Colca2F8VPY8 Gm43186-201ENSMUST00000198130 824 ntBASIC11.82□□□□□ -0.52
Colca2F8VPY8 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Colca2F8VPY8 Gm45575-201ENSMUST00000210283 548 ntBASIC11.82□□□□□ -0.52
Colca2F8VPY8 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.82□□□□□ -0.52
Colca2F8VPY8 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11.82□□□□□ -0.52
Colca2F8VPY8 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Colca2F8VPY8 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Colca2F8VPY8 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Colca2F8VPY8 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Colca2F8VPY8 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Colca2F8VPY8 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Colca2F8VPY8 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Colca2F8VPY8 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Colca2F8VPY8 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Colca2F8VPY8 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Colca2F8VPY8 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Colca2F8VPY8 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Colca2F8VPY8 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Colca2F8VPY8 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.82□□□□□ -0.52
Colca2F8VPY8 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Colca2F8VPY8 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Colca2F8VPY8 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Colca2F8VPY8 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Colca2F8VPY8 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Colca2F8VPY8 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.81□□□□□ -0.52
Colca2F8VPY8 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Colca2F8VPY8 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.81□□□□□ -0.52
Colca2F8VPY8 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Colca2F8VPY8 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Colca2F8VPY8 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Colca2F8VPY8 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.81□□□□□ -0.52
Colca2F8VPY8 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Colca2F8VPY8 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Colca2F8VPY8 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Colca2F8VPY8 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Colca2F8VPY8 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Colca2F8VPY8 Gm15566-201ENSMUST00000121130 590 ntBASIC11.81□□□□□ -0.52
Colca2F8VPY8 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC11.81□□□□□ -0.52
Colca2F8VPY8 Gm23218-201ENSMUST00000158124 276 ntBASIC11.81□□□□□ -0.52
Colca2F8VPY8 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Colca2F8VPY8 Gm21092-201ENSMUST00000178995 955 ntBASIC11.81□□□□□ -0.52
Colca2F8VPY8 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC11.81□□□□□ -0.52
Colca2F8VPY8 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.81□□□□□ -0.52
Colca2F8VPY8 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.81□□□□□ -0.52
Colca2F8VPY8 AC166341.2-201ENSMUST00000220571 120 ntBASIC11.81□□□□□ -0.52
Colca2F8VPY8 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Colca2F8VPY8 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Colca2F8VPY8 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Colca2F8VPY8 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Colca2F8VPY8 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.81□□□□□ -0.52
Colca2F8VPY8 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Colca2F8VPY8 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Colca2F8VPY8 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Colca2F8VPY8 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.81□□□□□ -0.52
Colca2F8VPY8 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Colca2F8VPY8 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Colca2F8VPY8 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Colca2F8VPY8 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Colca2F8VPY8 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Colca2F8VPY8 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Colca2F8VPY8 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Colca2F8VPY8 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 125.6 ms