Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh1F7BJK1 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh1F7BJK1 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.33□□□□□ -0.6
Pcdh1F7BJK1 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh1F7BJK1 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh1F7BJK1 Gm12859-201ENSMUST00000117834 427 ntBASIC11.33□□□□□ -0.6
Pcdh1F7BJK1 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Pcdh1F7BJK1 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh1F7BJK1 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Pcdh1F7BJK1 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh1F7BJK1 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC11.33□□□□□ -0.6
Pcdh1F7BJK1 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.33□□□□□ -0.6
Pcdh1F7BJK1 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.33□□□□□ -0.6
Pcdh1F7BJK1 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC11.33□□□□□ -0.6
Pcdh1F7BJK1 Gm2423-201ENSMUST00000074863 733 ntBASIC11.33□□□□□ -0.6
Pcdh1F7BJK1 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.33□□□□□ -0.6
Pcdh1F7BJK1 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh1F7BJK1 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh1F7BJK1 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh1F7BJK1 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh1F7BJK1 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh1F7BJK1 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh1F7BJK1 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh1F7BJK1 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Pcdh1F7BJK1 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh1F7BJK1 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh1F7BJK1 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh1F7BJK1 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh1F7BJK1 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh1F7BJK1 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh1F7BJK1 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.33□□□□□ -0.6
Pcdh1F7BJK1 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Pcdh1F7BJK1 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh1F7BJK1 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Pcdh1F7BJK1 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.33□□□□□ -0.6
Pcdh1F7BJK1 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh1F7BJK1 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Pcdh1F7BJK1 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Pcdh1F7BJK1 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.33□□□□□ -0.6
Pcdh1F7BJK1 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh1F7BJK1 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh1F7BJK1 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Gm15703-201ENSMUST00000120250 880 ntBASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 AC238811.3-201ENSMUST00000225422 709 ntBASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 CT025535.1-201ENSMUST00000227172 491 ntBASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Pcdh1F7BJK1 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms