Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb9E9Q5G2 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC14.77□□□□□ -0.04
Pcdhb9E9Q5G2 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb9E9Q5G2 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb9E9Q5G2 Gm4735-201ENSMUST00000138679 1302 ntBASIC14.77□□□□□ -0.04
Pcdhb9E9Q5G2 Gm5855-201ENSMUST00000200240 1305 ntBASIC14.77□□□□□ -0.04
Pcdhb9E9Q5G2 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb9E9Q5G2 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb9E9Q5G2 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb9E9Q5G2 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb9E9Q5G2 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Pcdhb9E9Q5G2 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
Pcdhb9E9Q5G2 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb9E9Q5G2 Gm26083-201ENSMUST00000157904 193 ntBASIC14.77□□□□□ -0.05
Pcdhb9E9Q5G2 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb9E9Q5G2 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb9E9Q5G2 Gm4857-201ENSMUST00000192718 785 ntBASIC14.77□□□□□ -0.05
Pcdhb9E9Q5G2 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb9E9Q5G2 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC14.77□□□□□ -0.05
Pcdhb9E9Q5G2 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC14.77□□□□□ -0.05
Pcdhb9E9Q5G2 AC154222.2-201ENSMUST00000225848 607 ntBASIC14.77□□□□□ -0.05
Pcdhb9E9Q5G2 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb9E9Q5G2 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Pcdhb9E9Q5G2 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb9E9Q5G2 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Pcdhb9E9Q5G2 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb9E9Q5G2 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Pcdhb9E9Q5G2 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb9E9Q5G2 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb9E9Q5G2 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb9E9Q5G2 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb9E9Q5G2 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb9E9Q5G2 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb9E9Q5G2 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb9E9Q5G2 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb9E9Q5G2 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhb9E9Q5G2 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb9E9Q5G2 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb9E9Q5G2 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb9E9Q5G2 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb9E9Q5G2 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb9E9Q5G2 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Pcdhb9E9Q5G2 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb9E9Q5G2 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb9E9Q5G2 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb9E9Q5G2 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC14.76□□□□□ -0.05
Pcdhb9E9Q5G2 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb9E9Q5G2 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb9E9Q5G2 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb9E9Q5G2 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Pcdhb9E9Q5G2 Gm14109-201ENSMUST00000118814 309 ntBASIC14.76□□□□□ -0.05
Pcdhb9E9Q5G2 Gm12749-201ENSMUST00000122138 1159 ntBASIC14.76□□□□□ -0.05
Pcdhb9E9Q5G2 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb9E9Q5G2 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC14.76□□□□□ -0.05
Pcdhb9E9Q5G2 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC14.76□□□□□ -0.05
Pcdhb9E9Q5G2 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC14.76□□□□□ -0.05
Pcdhb9E9Q5G2 Gm44958-201ENSMUST00000203734 736 ntBASIC14.76□□□□□ -0.05
Pcdhb9E9Q5G2 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb9E9Q5G2 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Pcdhb9E9Q5G2 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb9E9Q5G2 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
Pcdhb9E9Q5G2 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb9E9Q5G2 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb9E9Q5G2 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC14.76□□□□□ -0.05
Pcdhb9E9Q5G2 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb9E9Q5G2 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb9E9Q5G2 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb9E9Q5G2 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb9E9Q5G2 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb9E9Q5G2 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Pcdhb9E9Q5G2 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb9E9Q5G2 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb9E9Q5G2 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb9E9Q5G2 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb9E9Q5G2 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb9E9Q5G2 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb9E9Q5G2 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb9E9Q5G2 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb9E9Q5G2 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb9E9Q5G2 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Pcdhb9E9Q5G2 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb9E9Q5G2 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC14.75□□□□□ -0.05
Pcdhb9E9Q5G2 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Pcdhb9E9Q5G2 Gm27046-201ENSMUST00000182160 463 ntBASIC14.75□□□□□ -0.05
Pcdhb9E9Q5G2 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb9E9Q5G2 Gm38000-201ENSMUST00000192390 1215 ntBASIC14.75□□□□□ -0.05
Pcdhb9E9Q5G2 Gm38317-201ENSMUST00000195564 343 ntBASIC14.75□□□□□ -0.05
Pcdhb9E9Q5G2 Gm13097-201ENSMUST00000210722 397 ntBASIC14.75□□□□□ -0.05
Pcdhb9E9Q5G2 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC14.75□□□□□ -0.05
Pcdhb9E9Q5G2 CT009713.10-202ENSMUST00000225734 696 ntBASIC14.75□□□□□ -0.05
Pcdhb9E9Q5G2 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb9E9Q5G2 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Pcdhb9E9Q5G2 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb9E9Q5G2 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb9E9Q5G2 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb9E9Q5G2 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC14.75□□□□□ -0.05
Pcdhb9E9Q5G2 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb9E9Q5G2 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb9E9Q5G2 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb9E9Q5G2 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms