Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.44□□□□□ -0.58
Gm3543D3Z235 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.44□□□□□ -0.58
Gm3543D3Z235 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm3543D3Z235 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.44□□□□□ -0.58
Gm3543D3Z235 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Gm3543D3Z235 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm3543D3Z235 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm3543D3Z235 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Gm3543D3Z235 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.44□□□□□ -0.58
Gm3543D3Z235 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Gm3543D3Z235 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm3543D3Z235 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm3543D3Z235 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.44□□□□□ -0.58
Gm3543D3Z235 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm3543D3Z235 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Gm3543D3Z235 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.44□□□□□ -0.58
Gm3543D3Z235 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.43□□□□□ -0.58
Gm3543D3Z235 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Gm3543D3Z235 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm3543D3Z235 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm3543D3Z235 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm3543D3Z235 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.43□□□□□ -0.58
Gm3543D3Z235 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm3543D3Z235 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm3543D3Z235 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.43□□□□□ -0.58
Gm3543D3Z235 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm3543D3Z235 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Gm3543D3Z235 Gm22018-201ENSMUST00000104357 131 ntBASIC11.43□□□□□ -0.58
Gm3543D3Z235 Gm15198-201ENSMUST00000117283 177 ntBASIC11.43□□□□□ -0.58
Gm3543D3Z235 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.43□□□□□ -0.58
Gm3543D3Z235 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Gm3543D3Z235 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.43□□□□□ -0.58
Gm3543D3Z235 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.43□□□□□ -0.58
Gm3543D3Z235 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.43□□□□□ -0.58
Gm3543D3Z235 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.43□□□□□ -0.58
Gm3543D3Z235 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.43□□□□□ -0.58
Gm3543D3Z235 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm3543D3Z235 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm3543D3Z235 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Gm3543D3Z235 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm3543D3Z235 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm3543D3Z235 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Gm3543D3Z235 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.43□□□□□ -0.58
Gm3543D3Z235 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Gm3543D3Z235 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm3543D3Z235 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Gm3543D3Z235 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm3543D3Z235 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.43□□□□□ -0.58
Gm3543D3Z235 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm3543D3Z235 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm3543D3Z235 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3543D3Z235 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.42□□□□□ -0.58
Gm3543D3Z235 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3543D3Z235 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3543D3Z235 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3543D3Z235 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3543D3Z235 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3543D3Z235 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3543D3Z235 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Gm3543D3Z235 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Gm3543D3Z235 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Gm3543D3Z235 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3543D3Z235 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.42□□□□□ -0.58
Gm3543D3Z235 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3543D3Z235 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3543D3Z235 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3543D3Z235 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3543D3Z235 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3543D3Z235 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3543D3Z235 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3543D3Z235 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.42□□□□□ -0.58
Gm3543D3Z235 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3543D3Z235 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3543D3Z235 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3543D3Z235 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.42□□□□□ -0.58
Gm3543D3Z235 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.42□□□□□ -0.58
Gm3543D3Z235 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3543D3Z235 Gm38266-201ENSMUST00000194931 421 ntBASIC11.42□□□□□ -0.58
Gm3543D3Z235 Gm43133-201ENSMUST00000197472 463 ntBASIC11.42□□□□□ -0.58
Gm3543D3Z235 Gm43179-201ENSMUST00000198797 275 ntBASIC11.42□□□□□ -0.58
Gm3543D3Z235 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Gm3543D3Z235 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3543D3Z235 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3543D3Z235 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3543D3Z235 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3543D3Z235 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Gm3543D3Z235 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Gm3543D3Z235 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3543D3Z235 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.42□□□□□ -0.58
Gm3543D3Z235 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Gm3543D3Z235 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Gm3543D3Z235 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.42□□□□□ -0.58
Gm3543D3Z235 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3543D3Z235 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3543D3Z235 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3543D3Z235 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3543D3Z235 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.42□□□□□ -0.58
Gm3543D3Z235 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gm3543D3Z235 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Gm3543D3Z235 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms