Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC10.62□□□□□ -0.71
Col6a4A2AX52 Gm15432-201ENSMUST00000121106 195 ntBASIC10.62□□□□□ -0.71
Col6a4A2AX52 Mir1901-201ENSMUST00000122616 78 ntBASIC10.62□□□□□ -0.71
Col6a4A2AX52 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC10.62□□□□□ -0.71
Col6a4A2AX52 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC10.62□□□□□ -0.71
Col6a4A2AX52 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Col6a4A2AX52 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Col6a4A2AX52 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC10.62□□□□□ -0.71
Col6a4A2AX52 AY036118-201ENSMUST00000200021 923 ntBASIC10.62□□□□□ -0.71
Col6a4A2AX52 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC10.62□□□□□ -0.71
Col6a4A2AX52 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC10.62□□□□□ -0.71
Col6a4A2AX52 Gm270-201ENSMUST00000223010 976 ntBASIC10.62□□□□□ -0.71
Col6a4A2AX52 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Col6a4A2AX52 Gm25517-201ENSMUST00000083865 134 ntBASIC10.62□□□□□ -0.71
Col6a4A2AX52 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Col6a4A2AX52 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Col6a4A2AX52 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Col6a4A2AX52 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Col6a4A2AX52 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col6a4A2AX52 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Pcgf5-211ENSMUST00000225920 6443 ntBASIC10.61□□□□□ -0.71
Col6a4A2AX52 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Gm32999-201ENSMUST00000192693 562 ntBASIC10.61□□□□□ -0.71
Col6a4A2AX52 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Aprt-ps-201ENSMUST00000212311 505 ntBASIC10.61□□□□□ -0.71
Col6a4A2AX52 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col6a4A2AX52 AC163667.3-201ENSMUST00000225774 222 ntBASIC10.61□□□□□ -0.71
Col6a4A2AX52 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC10.61□□□□□ -0.71
Col6a4A2AX52 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC10.61□□□□□ -0.71
Col6a4A2AX52 AC124457.1-201ENSMUST00000198845 120 ntBASIC10.61□□□□□ -0.71
Col6a4A2AX52 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Col6a4A2AX52 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC10.61□□□□□ -0.71
Col6a4A2AX52 AC154222.2-201ENSMUST00000225848 607 ntBASIC10.61□□□□□ -0.71
Col6a4A2AX52 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col6a4A2AX52 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col6a4A2AX52 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col6a4A2AX52 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col6a4A2AX52 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col6a4A2AX52 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col6a4A2AX52 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC10.6□□□□□ -0.71
Col6a4A2AX52 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Col6a4A2AX52 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col6a4A2AX52 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC10.6□□□□□ -0.71
Col6a4A2AX52 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col6a4A2AX52 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col6a4A2AX52 Gm6580-201ENSMUST00000117504 1357 ntBASIC10.6□□□□□ -0.71
Col6a4A2AX52 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col6a4A2AX52 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col6a4A2AX52 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Col6a4A2AX52 Gm42928-201ENSMUST00000197338 3339 ntBASIC10.6□□□□□ -0.71
Col6a4A2AX52 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col6a4A2AX52 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Col6a4A2AX52 Gm13035-201ENSMUST00000117496 342 ntBASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms