Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb1A2AQ07 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Tubb1A2AQ07 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.87□□□□□ -0.35
Tubb1A2AQ07 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Tubb1A2AQ07 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb1A2AQ07 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Tubb1A2AQ07 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.87□□□□□ -0.35
Tubb1A2AQ07 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb1A2AQ07 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb1A2AQ07 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb1A2AQ07 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb1A2AQ07 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Tubb1A2AQ07 Gm12384-201ENSMUST00000119228 919 ntBASIC12.87□□□□□ -0.35
Tubb1A2AQ07 Gm11591-201ENSMUST00000120063 702 ntBASIC12.87□□□□□ -0.35
Tubb1A2AQ07 Gm11597-201ENSMUST00000121423 964 ntBASIC12.87□□□□□ -0.35
Tubb1A2AQ07 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.87□□□□□ -0.35
Tubb1A2AQ07 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.87□□□□□ -0.35
Tubb1A2AQ07 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb1A2AQ07 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Tubb1A2AQ07 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb1A2AQ07 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb1A2AQ07 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb1A2AQ07 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb1A2AQ07 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Tubb1A2AQ07 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb1A2AQ07 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Tubb1A2AQ07 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.87□□□□□ -0.35
Tubb1A2AQ07 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb1A2AQ07 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.87□□□□□ -0.35
Tubb1A2AQ07 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tubb1A2AQ07 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubb1A2AQ07 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Tubb1A2AQ07 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.86□□□□□ -0.35
Tubb1A2AQ07 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Tubb1A2AQ07 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubb1A2AQ07 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubb1A2AQ07 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Tubb1A2AQ07 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tubb1A2AQ07 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.86□□□□□ -0.35
Tubb1A2AQ07 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubb1A2AQ07 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.86□□□□□ -0.35
Tubb1A2AQ07 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tubb1A2AQ07 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Tubb1A2AQ07 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tubb1A2AQ07 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.86□□□□□ -0.35
Tubb1A2AQ07 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Tubb1A2AQ07 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.86□□□□□ -0.35
Tubb1A2AQ07 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.86□□□□□ -0.35
Tubb1A2AQ07 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.86□□□□□ -0.35
Tubb1A2AQ07 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubb1A2AQ07 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tubb1A2AQ07 Gm9022-201ENSMUST00000182482 992 ntBASIC12.86□□□□□ -0.35
Tubb1A2AQ07 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Tubb1A2AQ07 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tubb1A2AQ07 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubb1A2AQ07 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubb1A2AQ07 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubb1A2AQ07 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubb1A2AQ07 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Tubb1A2AQ07 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Tubb1A2AQ07 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubb1A2AQ07 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubb1A2AQ07 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.86□□□□□ -0.35
Tubb1A2AQ07 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubb1A2AQ07 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubb1A2AQ07 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tubb1A2AQ07 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubb1A2AQ07 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Tubb1A2AQ07 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.86□□□□□ -0.35
Tubb1A2AQ07 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tubb1A2AQ07 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tubb1A2AQ07 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Tubb1A2AQ07 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Tubb1A2AQ07 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.85□□□□□ -0.35
Tubb1A2AQ07 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.85□□□□□ -0.35
Tubb1A2AQ07 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.85□□□□□ -0.35
Tubb1A2AQ07 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Tubb1A2AQ07 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.85□□□□□ -0.35
Tubb1A2AQ07 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tubb1A2AQ07 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.85□□□□□ -0.35
Tubb1A2AQ07 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.85□□□□□ -0.35
Tubb1A2AQ07 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.85□□□□□ -0.35
Tubb1A2AQ07 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tubb1A2AQ07 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tubb1A2AQ07 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tubb1A2AQ07 Gm27390-201ENSMUST00000184516 176 ntBASIC12.85□□□□□ -0.35
Tubb1A2AQ07 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.85□□□□□ -0.35
Tubb1A2AQ07 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tubb1A2AQ07 Gm43818-201ENSMUST00000200605 466 ntBASIC12.85□□□□□ -0.35
Tubb1A2AQ07 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.85□□□□□ -0.35
Tubb1A2AQ07 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Tubb1A2AQ07 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tubb1A2AQ07 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tubb1A2AQ07 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tubb1A2AQ07 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Tubb1A2AQ07 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tubb1A2AQ07 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.85□□□□□ -0.35
Tubb1A2AQ07 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tubb1A2AQ07 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.85□□□□□ -0.35
Tubb1A2AQ07 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms