Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Gm21660-201ENSMUST00000195789 696 ntBASIC6.45□□□□□ -1.38
Ubr4A2AN08 Gm30946-201ENSMUST00000198288 724 ntBASIC6.45□□□□□ -1.38
Ubr4A2AN08 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Ubr4A2AN08 AC159006.3-201ENSMUST00000226918 664 ntBASIC6.45□□□□□ -1.38
Ubr4A2AN08 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Ubr4A2AN08 Gm5466-201ENSMUST00000119395 1890 ntBASIC6.45□□□□□ -1.38
Ubr4A2AN08 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Ubr4A2AN08 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC6.45□□□□□ -1.38
Ubr4A2AN08 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Ubr4A2AN08 Pax5-202ENSMUST00000102932 1460 ntTSL 5 BASIC6.45□□□□□ -1.38
Ubr4A2AN08 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Ubr4A2AN08 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Ubr4A2AN08 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC6.45□□□□□ -1.38
Ubr4A2AN08 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Ubr4A2AN08 Gm9061-201ENSMUST00000182707 1006 ntBASIC6.45□□□□□ -1.38
Ubr4A2AN08 Gm6518-201ENSMUST00000208450 342 ntBASIC6.45□□□□□ -1.38
Ubr4A2AN08 CAAA01125382.3-201ENSMUST00000215277 643 ntBASIC6.45□□□□□ -1.38
Ubr4A2AN08 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC6.45□□□□□ -1.38
Ubr4A2AN08 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Ubr4A2AN08 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
Ubr4A2AN08 Taar1-201ENSMUST00000051532 1114 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Ubr4A2AN08 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Ubr4A2AN08 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Ubr4A2AN08 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Ubr4A2AN08 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Ubr4A2AN08 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Ubr4A2AN08 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Ubr4A2AN08 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Ubr4A2AN08 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Ubr4A2AN08 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Ubr4A2AN08 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Ubr4A2AN08 Gm15606-202ENSMUST00000139851 711 ntTSL 3 BASIC6.45□□□□□ -1.38
Ubr4A2AN08 Gm17197-201ENSMUST00000163160 452 ntTSL 2 BASIC6.45□□□□□ -1.38
Ubr4A2AN08 Gm5976-201ENSMUST00000180794 996 ntBASIC6.45□□□□□ -1.38
Ubr4A2AN08 Gm37678-201ENSMUST00000192908 1146 ntBASIC6.45□□□□□ -1.38
Ubr4A2AN08 Gm46349-201ENSMUST00000219678 917 ntTSL 5 BASIC6.45□□□□□ -1.38
Ubr4A2AN08 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC6.45□□□□□ -1.38
Ubr4A2AN08 AC125409.3-201ENSMUST00000223488 653 ntBASIC6.45□□□□□ -1.38
Ubr4A2AN08 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Ubr4A2AN08 Gm43509-201ENSMUST00000196551 2594 ntBASIC6.45□□□□□ -1.38
Ubr4A2AN08 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Ubr4A2AN08 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Ubr4A2AN08 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC6.45□□□□□ -1.38
Ubr4A2AN08 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Ubr4A2AN08 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Ubr4A2AN08 Gm43548-201ENSMUST00000197139 2353 ntBASIC6.45□□□□□ -1.38
Ubr4A2AN08 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Ubr4A2AN08 Odam-201ENSMUST00000113274 872 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Ubr4A2AN08 Gm7572-201ENSMUST00000182616 766 ntBASIC6.45□□□□□ -1.38
Ubr4A2AN08 Pebp1-201ENSMUST00000036951 1240 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Ubr4A2AN08 Tnnt1-201ENSMUST00000071798 1027 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
Ubr4A2AN08 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Ubr4A2AN08 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
Ubr4A2AN08 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Ubr4A2AN08 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Ubr4A2AN08 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Ubr4A2AN08 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC6.44□□□□□ -1.38
Ubr4A2AN08 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Ubr4A2AN08 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Ubr4A2AN08 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Ubr4A2AN08 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Ubr4A2AN08 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
Ubr4A2AN08 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Ubr4A2AN08 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Ubr4A2AN08 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC6.44□□□□□ -1.38
Ubr4A2AN08 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC6.44□□□□□ -1.38
Ubr4A2AN08 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Ubr4A2AN08 Cd24a-202ENSMUST00000214476 743 ntAPPRIS ALT2 TSL 3 BASIC6.44□□□□□ -1.38
Ubr4A2AN08 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Ubr4A2AN08 Fibp-201ENSMUST00000025847 1215 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Ubr4A2AN08 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC6.44□□□□□ -1.38
Ubr4A2AN08 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
Ubr4A2AN08 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC6.44□□□□□ -1.38
Ubr4A2AN08 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Ubr4A2AN08 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Ubr4A2AN08 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Ubr4A2AN08 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Ubr4A2AN08 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Ubr4A2AN08 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Ubr4A2AN08 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Ubr4A2AN08 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Ubr4A2AN08 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Ubr4A2AN08 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
Ubr4A2AN08 Gm6161-201ENSMUST00000121942 1102 ntBASIC6.44□□□□□ -1.38
Ubr4A2AN08 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Ubr4A2AN08 Gm6153-201ENSMUST00000172004 1058 ntBASIC6.44□□□□□ -1.38
Ubr4A2AN08 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC6.44□□□□□ -1.38
Ubr4A2AN08 Gm5641-202ENSMUST00000198699 1080 ntBASIC6.44□□□□□ -1.38
Ubr4A2AN08 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC6.44□□□□□ -1.38
Ubr4A2AN08 Gm3198-201ENSMUST00000208725 1026 ntBASIC6.44□□□□□ -1.38
Ubr4A2AN08 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC6.44□□□□□ -1.38
Ubr4A2AN08 AC112945.1-201ENSMUST00000226413 514 ntBASIC6.44□□□□□ -1.38
Ubr4A2AN08 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
Ubr4A2AN08 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC6.44□□□□□ -1.38
Ubr4A2AN08 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Ubr4A2AN08 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Ubr4A2AN08 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC6.44□□□□□ -1.38
Ubr4A2AN08 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Ubr4A2AN08 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Ubr4A2AN08 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms