Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav7n-4A0A075B620 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav7n-4A0A075B620 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav7n-4A0A075B620 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC9.5□□□□□ -0.89
Trav7n-4A0A075B620 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav7n-4A0A075B620 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC9.5□□□□□ -0.89
Trav7n-4A0A075B620 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC9.5□□□□□ -0.89
Trav7n-4A0A075B620 Gm11978-201ENSMUST00000122315 466 ntBASIC9.5□□□□□ -0.89
Trav7n-4A0A075B620 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trav7n-4A0A075B620 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC9.5□□□□□ -0.89
Trav7n-4A0A075B620 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Trav7n-4A0A075B620 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC9.5□□□□□ -0.89
Trav7n-4A0A075B620 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Trav7n-4A0A075B620 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC9.5□□□□□ -0.89
Trav7n-4A0A075B620 Gm27494-201ENSMUST00000184735 189 ntBASIC9.5□□□□□ -0.89
Trav7n-4A0A075B620 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trav7n-4A0A075B620 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC9.5□□□□□ -0.89
Trav7n-4A0A075B620 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trav7n-4A0A075B620 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav7n-4A0A075B620 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav7n-4A0A075B620 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav7n-4A0A075B620 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav7n-4A0A075B620 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav7n-4A0A075B620 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav7n-4A0A075B620 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav7n-4A0A075B620 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav7n-4A0A075B620 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav7n-4A0A075B620 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trav7n-4A0A075B620 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC9.5□□□□□ -0.89
Trav7n-4A0A075B620 Gm45776-201ENSMUST00000212366 1522 ntBASIC9.5□□□□□ -0.89
Trav7n-4A0A075B620 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav7n-4A0A075B620 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Trav7n-4A0A075B620 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Trav7n-4A0A075B620 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
Trav7n-4A0A075B620 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav7n-4A0A075B620 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Trav7n-4A0A075B620 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC9.5□□□□□ -0.89
Trav7n-4A0A075B620 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC9.5□□□□□ -0.89
Trav7n-4A0A075B620 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC9.5□□□□□ -0.89
Trav7n-4A0A075B620 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav7n-4A0A075B620 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Trav7n-4A0A075B620 Gm42463-201ENSMUST00000198041 4886 ntBASIC9.49□□□□□ -0.89
Trav7n-4A0A075B620 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav7n-4A0A075B620 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC9.49□□□□□ -0.89
Trav7n-4A0A075B620 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav7n-4A0A075B620 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav7n-4A0A075B620 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav7n-4A0A075B620 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav7n-4A0A075B620 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav7n-4A0A075B620 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav7n-4A0A075B620 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Trav7n-4A0A075B620 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC9.49□□□□□ -0.89
Trav7n-4A0A075B620 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC9.49□□□□□ -0.89
Trav7n-4A0A075B620 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Trav7n-4A0A075B620 Gm12260-201ENSMUST00000122447 411 ntBASIC9.49□□□□□ -0.89
Trav7n-4A0A075B620 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC9.49□□□□□ -0.89
Trav7n-4A0A075B620 Gm3436-201ENSMUST00000179930 840 ntBASIC9.49□□□□□ -0.89
Trav7n-4A0A075B620 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC9.49□□□□□ -0.89
Trav7n-4A0A075B620 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC9.49□□□□□ -0.89
Trav7n-4A0A075B620 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC9.49□□□□□ -0.89
Trav7n-4A0A075B620 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav7n-4A0A075B620 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Trav7n-4A0A075B620 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav7n-4A0A075B620 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Trav7n-4A0A075B620 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav7n-4A0A075B620 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav7n-4A0A075B620 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav7n-4A0A075B620 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav7n-4A0A075B620 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC9.49□□□□□ -0.89
Trav7n-4A0A075B620 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav7n-4A0A075B620 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav7n-4A0A075B620 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav7n-4A0A075B620 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav7n-4A0A075B620 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav7n-4A0A075B620 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav7n-4A0A075B620 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav7n-4A0A075B620 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav7n-4A0A075B620 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav7n-4A0A075B620 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC9.49□□□□□ -0.89
Trav7n-4A0A075B620 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav7n-4A0A075B620 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav7n-4A0A075B620 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav7n-4A0A075B620 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav7n-4A0A075B620 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 106.8 ms