Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.09□□□□□ -0.31
Smarcb1Q9Z0H3 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcb1Q9Z0H3 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.08□□□□□ -0.31
Smarcb1Q9Z0H3 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Smarcb1Q9Z0H3 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.31
Smarcb1Q9Z0H3 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
Smarcb1Q9Z0H3 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Smarcb1Q9Z0H3 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Smarcb1Q9Z0H3 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcb1Q9Z0H3 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcb1Q9Z0H3 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcb1Q9Z0H3 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcb1Q9Z0H3 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Smarcb1Q9Z0H3 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Smarcb1Q9Z0H3 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcb1Q9Z0H3 Gm13296-201ENSMUST00000117854 997 ntBASIC13.08□□□□□ -0.32
Smarcb1Q9Z0H3 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.08□□□□□ -0.32
Smarcb1Q9Z0H3 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcb1Q9Z0H3 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC13.08□□□□□ -0.32
Smarcb1Q9Z0H3 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC13.08□□□□□ -0.32
Smarcb1Q9Z0H3 Gm6963-201ENSMUST00000147879 379 ntBASIC13.08□□□□□ -0.32
Smarcb1Q9Z0H3 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC13.08□□□□□ -0.32
Smarcb1Q9Z0H3 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC13.08□□□□□ -0.32
Smarcb1Q9Z0H3 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.08□□□□□ -0.32
Smarcb1Q9Z0H3 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.08□□□□□ -0.32
Smarcb1Q9Z0H3 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcb1Q9Z0H3 Gm19187-201ENSMUST00000206781 892 ntBASIC13.08□□□□□ -0.32
Smarcb1Q9Z0H3 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC13.08□□□□□ -0.32
Smarcb1Q9Z0H3 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcb1Q9Z0H3 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcb1Q9Z0H3 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcb1Q9Z0H3 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcb1Q9Z0H3 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Smarcb1Q9Z0H3 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcb1Q9Z0H3 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Smarcb1Q9Z0H3 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcb1Q9Z0H3 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcb1Q9Z0H3 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcb1Q9Z0H3 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Smarcb1Q9Z0H3 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcb1Q9Z0H3 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcb1Q9Z0H3 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcb1Q9Z0H3 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcb1Q9Z0H3 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcb1Q9Z0H3 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC13.08□□□□□ -0.32
Smarcb1Q9Z0H3 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcb1Q9Z0H3 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Smarcb1Q9Z0H3 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcb1Q9Z0H3 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcb1Q9Z0H3 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcb1Q9Z0H3 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Smarcb1Q9Z0H3 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcb1Q9Z0H3 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcb1Q9Z0H3 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcb1Q9Z0H3 Gm5846-201ENSMUST00000193146 1414 ntBASIC13.07□□□□□ -0.32
Smarcb1Q9Z0H3 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.07□□□□□ -0.32
Smarcb1Q9Z0H3 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.07□□□□□ -0.32
Smarcb1Q9Z0H3 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcb1Q9Z0H3 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Smarcb1Q9Z0H3 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.07□□□□□ -0.32
Smarcb1Q9Z0H3 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcb1Q9Z0H3 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcb1Q9Z0H3 Gm14644-201ENSMUST00000116671 647 ntBASIC13.07□□□□□ -0.32
Smarcb1Q9Z0H3 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.07□□□□□ -0.32
Smarcb1Q9Z0H3 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Smarcb1Q9Z0H3 Gm32999-201ENSMUST00000192693 562 ntBASIC13.07□□□□□ -0.32
Smarcb1Q9Z0H3 Gm44958-201ENSMUST00000203734 736 ntBASIC13.07□□□□□ -0.32
Smarcb1Q9Z0H3 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcb1Q9Z0H3 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.07□□□□□ -0.32
Smarcb1Q9Z0H3 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcb1Q9Z0H3 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcb1Q9Z0H3 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcb1Q9Z0H3 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcb1Q9Z0H3 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Smarcb1Q9Z0H3 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.07□□□□□ -0.32
Smarcb1Q9Z0H3 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcb1Q9Z0H3 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcb1Q9Z0H3 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcb1Q9Z0H3 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.07□□□□□ -0.32
Smarcb1Q9Z0H3 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcb1Q9Z0H3 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.07□□□□□ -0.32
Smarcb1Q9Z0H3 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcb1Q9Z0H3 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcb1Q9Z0H3 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcb1Q9Z0H3 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.07□□□□□ -0.32
Smarcb1Q9Z0H3 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.07□□□□□ -0.32
Smarcb1Q9Z0H3 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcb1Q9Z0H3 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Smarcb1Q9Z0H3 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcb1Q9Z0H3 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcb1Q9Z0H3 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Smarcb1Q9Z0H3 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcb1Q9Z0H3 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcb1Q9Z0H3 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcb1Q9Z0H3 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcb1Q9Z0H3 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcb1Q9Z0H3 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcb1Q9Z0H3 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcb1Q9Z0H3 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcb1Q9Z0H3 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms