Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 Gm37666-201ENSMUST00000194110 866 ntBASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 Gm11989-201ENSMUST00000117240 672 ntBASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 Gm7857-201ENSMUST00000117957 358 ntBASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 Gm11362-201ENSMUST00000118838 850 ntBASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 Gm44882-201ENSMUST00000205702 802 ntBASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn8aQ9WTU3 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Scn8aQ9WTU3 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn8aQ9WTU3 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn8aQ9WTU3 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn8aQ9WTU3 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn8aQ9WTU3 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn8aQ9WTU3 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn8aQ9WTU3 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Scn8aQ9WTU3 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn8aQ9WTU3 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
Scn8aQ9WTU3 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Scn8aQ9WTU3 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn8aQ9WTU3 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.59□□□□□ -0.39
Scn8aQ9WTU3 Gm9230-201ENSMUST00000188228 532 ntBASIC12.59□□□□□ -0.39
Scn8aQ9WTU3 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Scn8aQ9WTU3 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn8aQ9WTU3 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn8aQ9WTU3 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Scn8aQ9WTU3 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn8aQ9WTU3 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn8aQ9WTU3 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn8aQ9WTU3 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn8aQ9WTU3 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn8aQ9WTU3 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Scn8aQ9WTU3 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn8aQ9WTU3 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.59□□□□□ -0.39
Scn8aQ9WTU3 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn8aQ9WTU3 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Scn8aQ9WTU3 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Scn8aQ9WTU3 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn8aQ9WTU3 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Scn8aQ9WTU3 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Scn8aQ9WTU3 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.58□□□□□ -0.39
Scn8aQ9WTU3 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms