Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Hmgn5Q9JL35 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn5Q9JL35 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn5Q9JL35 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Hmgn5Q9JL35 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn5Q9JL35 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn5Q9JL35 Gm14350-201ENSMUST00000116642 640 ntBASIC14.15□□□□□ -0.14
Hmgn5Q9JL35 Gm14921-201ENSMUST00000118643 908 ntBASIC14.15□□□□□ -0.14
Hmgn5Q9JL35 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn5Q9JL35 Gm27741-201ENSMUST00000185060 237 ntBASIC14.15□□□□□ -0.14
Hmgn5Q9JL35 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.15□□□□□ -0.14
Hmgn5Q9JL35 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.15□□□□□ -0.14
Hmgn5Q9JL35 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.15□□□□□ -0.14
Hmgn5Q9JL35 Gm44069-201ENSMUST00000204898 506 ntBASIC14.15□□□□□ -0.14
Hmgn5Q9JL35 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.15□□□□□ -0.14
Hmgn5Q9JL35 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn5Q9JL35 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Hmgn5Q9JL35 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn5Q9JL35 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn5Q9JL35 Gm18983-201ENSMUST00000222884 2729 ntBASIC14.15□□□□□ -0.14
Hmgn5Q9JL35 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn5Q9JL35 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn5Q9JL35 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn5Q9JL35 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn5Q9JL35 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Hmgn5Q9JL35 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn5Q9JL35 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn5Q9JL35 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn5Q9JL35 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn5Q9JL35 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn5Q9JL35 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn5Q9JL35 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC14.15□□□□□ -0.14
Hmgn5Q9JL35 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn5Q9JL35 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn5Q9JL35 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmgn5Q9JL35 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Hmgn5Q9JL35 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Hmgn5Q9JL35 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn5Q9JL35 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Hmgn5Q9JL35 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn5Q9JL35 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn5Q9JL35 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn5Q9JL35 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Hmgn5Q9JL35 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn5Q9JL35 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Hmgn5Q9JL35 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Hmgn5Q9JL35 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Hmgn5Q9JL35 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn5Q9JL35 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC14.14□□□□□ -0.15
Hmgn5Q9JL35 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.14□□□□□ -0.15
Hmgn5Q9JL35 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.14□□□□□ -0.15
Hmgn5Q9JL35 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Hmgn5Q9JL35 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.14□□□□□ -0.15
Hmgn5Q9JL35 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.14□□□□□ -0.15
Hmgn5Q9JL35 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn5Q9JL35 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn5Q9JL35 Gm8396-201ENSMUST00000057361 823 ntBASIC14.14□□□□□ -0.15
Hmgn5Q9JL35 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn5Q9JL35 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn5Q9JL35 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn5Q9JL35 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Hmgn5Q9JL35 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn5Q9JL35 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC14.14□□□□□ -0.15
Hmgn5Q9JL35 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Hmgn5Q9JL35 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn5Q9JL35 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Hmgn5Q9JL35 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn5Q9JL35 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn5Q9JL35 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn5Q9JL35 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Hmgn5Q9JL35 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn5Q9JL35 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn5Q9JL35 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.14□□□□□ -0.15
Hmgn5Q9JL35 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgn5Q9JL35 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn5Q9JL35 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn5Q9JL35 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn5Q9JL35 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn5Q9JL35 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn5Q9JL35 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
Hmgn5Q9JL35 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn5Q9JL35 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn5Q9JL35 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC14.13□□□□□ -0.15
Hmgn5Q9JL35 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.13□□□□□ -0.15
Hmgn5Q9JL35 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn5Q9JL35 Gm13394-201ENSMUST00000121658 1000 ntBASIC14.13□□□□□ -0.15
Hmgn5Q9JL35 Gm14760-201ENSMUST00000121831 999 ntBASIC14.13□□□□□ -0.15
Hmgn5Q9JL35 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn5Q9JL35 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn5Q9JL35 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Hmgn5Q9JL35 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn5Q9JL35 AW822252-206ENSMUST00000208904 237 ntBASIC14.13□□□□□ -0.15
Hmgn5Q9JL35 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn5Q9JL35 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn5Q9JL35 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn5Q9JL35 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn5Q9JL35 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Hmgn5Q9JL35 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Hmgn5Q9JL35 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgn5Q9JL35 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms