Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb3Q9ERD7 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb3Q9ERD7 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb3Q9ERD7 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb3Q9ERD7 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Tubb3Q9ERD7 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb3Q9ERD7 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Tubb3Q9ERD7 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Tubb3Q9ERD7 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb3Q9ERD7 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb3Q9ERD7 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb3Q9ERD7 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb3Q9ERD7 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb3Q9ERD7 Mir686-201ENSMUST00000102174 109 ntBASIC12.54□□□□□ -0.4
Tubb3Q9ERD7 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.54□□□□□ -0.4
Tubb3Q9ERD7 Gm13123-201ENSMUST00000122173 492 ntBASIC12.54□□□□□ -0.4
Tubb3Q9ERD7 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.54□□□□□ -0.4
Tubb3Q9ERD7 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb3Q9ERD7 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb3Q9ERD7 Gm45880-201ENSMUST00000213041 853 ntBASIC12.54□□□□□ -0.4
Tubb3Q9ERD7 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb3Q9ERD7 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.54□□□□□ -0.4
Tubb3Q9ERD7 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb3Q9ERD7 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb3Q9ERD7 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb3Q9ERD7 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Tubb3Q9ERD7 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Tubb3Q9ERD7 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Tubb3Q9ERD7 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb3Q9ERD7 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.54□□□□□ -0.4
Tubb3Q9ERD7 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb3Q9ERD7 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb3Q9ERD7 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb3Q9ERD7 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb3Q9ERD7 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb3Q9ERD7 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb3Q9ERD7 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb3Q9ERD7 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Tubb3Q9ERD7 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.54□□□□□ -0.4
Tubb3Q9ERD7 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Tubb3Q9ERD7 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Tubb3Q9ERD7 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb3Q9ERD7 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Tubb3Q9ERD7 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb3Q9ERD7 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.54□□□□□ -0.4
Tubb3Q9ERD7 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubb3Q9ERD7 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubb3Q9ERD7 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubb3Q9ERD7 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubb3Q9ERD7 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubb3Q9ERD7 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubb3Q9ERD7 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubb3Q9ERD7 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubb3Q9ERD7 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Tubb3Q9ERD7 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.53□□□□□ -0.4
Tubb3Q9ERD7 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Tubb3Q9ERD7 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Tubb3Q9ERD7 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.53□□□□□ -0.4
Tubb3Q9ERD7 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.53□□□□□ -0.4
Tubb3Q9ERD7 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.53□□□□□ -0.4
Tubb3Q9ERD7 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.53□□□□□ -0.4
Tubb3Q9ERD7 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubb3Q9ERD7 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
Tubb3Q9ERD7 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.53□□□□□ -0.4
Tubb3Q9ERD7 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.53□□□□□ -0.4
Tubb3Q9ERD7 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.53□□□□□ -0.4
Tubb3Q9ERD7 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubb3Q9ERD7 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Tubb3Q9ERD7 Gm6013-201ENSMUST00000212264 699 ntBASIC12.53□□□□□ -0.4
Tubb3Q9ERD7 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.53□□□□□ -0.4
Tubb3Q9ERD7 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.53□□□□□ -0.4
Tubb3Q9ERD7 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.53□□□□□ -0.4
Tubb3Q9ERD7 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubb3Q9ERD7 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubb3Q9ERD7 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubb3Q9ERD7 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubb3Q9ERD7 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.53□□□□□ -0.4
Tubb3Q9ERD7 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubb3Q9ERD7 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.53□□□□□ -0.4
Tubb3Q9ERD7 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubb3Q9ERD7 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubb3Q9ERD7 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Tubb3Q9ERD7 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubb3Q9ERD7 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tubb3Q9ERD7 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubb3Q9ERD7 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubb3Q9ERD7 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tubb3Q9ERD7 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tubb3Q9ERD7 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Tubb3Q9ERD7 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.52□□□□□ -0.4
Tubb3Q9ERD7 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tubb3Q9ERD7 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.52□□□□□ -0.4
Tubb3Q9ERD7 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tubb3Q9ERD7 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Tubb3Q9ERD7 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tubb3Q9ERD7 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Tubb3Q9ERD7 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.52□□□□□ -0.4
Tubb3Q9ERD7 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.4
Tubb3Q9ERD7 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tubb3Q9ERD7 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms