Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rrp8Q9DB85 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rrp8Q9DB85 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rrp8Q9DB85 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rrp8Q9DB85 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rrp8Q9DB85 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.36□□□□□ -0.43
Rrp8Q9DB85 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rrp8Q9DB85 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Rrp8Q9DB85 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp8Q9DB85 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC12.35□□□□□ -0.43
Rrp8Q9DB85 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Gm13315-201ENSMUST00000120376 991 ntBASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Gm13813-201ENSMUST00000120998 787 ntBASIC12.35□□□□□ -0.43
Rrp8Q9DB85 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Gm3508-201ENSMUST00000186012 792 ntBASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Gm7003-201ENSMUST00000195089 312 ntBASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Gm39404-201ENSMUST00000216350 313 ntBASIC12.35□□□□□ -0.43
Rrp8Q9DB85 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rrp8Q9DB85 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp8Q9DB85 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp8Q9DB85 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.34□□□□□ -0.43
Rrp8Q9DB85 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp8Q9DB85 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp8Q9DB85 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp8Q9DB85 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.34□□□□□ -0.43
Rrp8Q9DB85 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.34□□□□□ -0.43
Rrp8Q9DB85 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp8Q9DB85 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp8Q9DB85 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp8Q9DB85 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp8Q9DB85 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp8Q9DB85 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp8Q9DB85 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp8Q9DB85 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp8Q9DB85 Gm9062-201ENSMUST00000117712 727 ntBASIC12.34□□□□□ -0.43
Rrp8Q9DB85 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.34□□□□□ -0.43
Rrp8Q9DB85 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.34□□□□□ -0.43
Rrp8Q9DB85 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp8Q9DB85 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp8Q9DB85 Gm9550-201ENSMUST00000161130 862 ntBASIC12.34□□□□□ -0.43
Rrp8Q9DB85 Gm45118-201ENSMUST00000208928 825 ntBASIC12.34□□□□□ -0.43
Rrp8Q9DB85 CT009718.3-201ENSMUST00000221116 367 ntBASIC12.34□□□□□ -0.43
Rrp8Q9DB85 Spcs1-203ENSMUST00000226374 592 ntBASIC12.34□□□□□ -0.43
Rrp8Q9DB85 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp8Q9DB85 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.34□□□□□ -0.43
Rrp8Q9DB85 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp8Q9DB85 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp8Q9DB85 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.34□□□□□ -0.43
Rrp8Q9DB85 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp8Q9DB85 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rrp8Q9DB85 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp8Q9DB85 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp8Q9DB85 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp8Q9DB85 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp8Q9DB85 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp8Q9DB85 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp8Q9DB85 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rrp8Q9DB85 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms