Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Stag1Q9D3E6 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Stag1Q9D3E6 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Stag1Q9D3E6 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Stag1Q9D3E6 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Stag1Q9D3E6 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Stag1Q9D3E6 Gm42748-201ENSMUST00000199354 2341 ntBASIC15.03■□□□□ -0
Stag1Q9D3E6 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC15.02■□□□□ -0
Stag1Q9D3E6 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Stag1Q9D3E6 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Stag1Q9D3E6 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
Stag1Q9D3E6 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Stag1Q9D3E6 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC15.02■□□□□ -0
Stag1Q9D3E6 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Stag1Q9D3E6 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC15.02■□□□□ -0
Stag1Q9D3E6 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Stag1Q9D3E6 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Stag1Q9D3E6 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC15.02■□□□□ -0
Stag1Q9D3E6 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Stag1Q9D3E6 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC15.02■□□□□ -0
Stag1Q9D3E6 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC15.02■□□□□ -0
Stag1Q9D3E6 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Stag1Q9D3E6 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC15.02■□□□□ -0
Stag1Q9D3E6 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC15.02■□□□□ -0
Stag1Q9D3E6 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC15.02■□□□□ -0
Stag1Q9D3E6 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Stag1Q9D3E6 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Stag1Q9D3E6 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Stag1Q9D3E6 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC15.02■□□□□ -0
Stag1Q9D3E6 Gm8913-201ENSMUST00000209491 641 ntBASIC15.02■□□□□ -0
Stag1Q9D3E6 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
Stag1Q9D3E6 Abhd11os-203ENSMUST00000222613 363 ntBASIC15.02■□□□□ -0
Stag1Q9D3E6 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Stag1Q9D3E6 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC15.02■□□□□ -0
Stag1Q9D3E6 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC15.02■□□□□ -0
Stag1Q9D3E6 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Stag1Q9D3E6 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Stag1Q9D3E6 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Stag1Q9D3E6 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Stag1Q9D3E6 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Stag1Q9D3E6 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Stag1Q9D3E6 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Stag1Q9D3E6 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Stag1Q9D3E6 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Stag1Q9D3E6 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Stag1Q9D3E6 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Stag1Q9D3E6 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Stag1Q9D3E6 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC15.01□□□□□ -0.01
Stag1Q9D3E6 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Stag1Q9D3E6 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Stag1Q9D3E6 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC15.01□□□□□ -0.01
Stag1Q9D3E6 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC15.01□□□□□ -0.01
Stag1Q9D3E6 Mir6979-201ENSMUST00000183927 56 ntBASIC15.01□□□□□ -0.01
Stag1Q9D3E6 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Stag1Q9D3E6 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC15.01□□□□□ -0.01
Stag1Q9D3E6 AC093022.5-201ENSMUST00000226841 1079 ntBASIC15.01□□□□□ -0.01
Stag1Q9D3E6 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Stag1Q9D3E6 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Stag1Q9D3E6 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Stag1Q9D3E6 Gm37644-201ENSMUST00000192190 2270 ntBASIC15.01□□□□□ -0.01
Stag1Q9D3E6 Gm42863-201ENSMUST00000197875 2958 ntBASIC15.01□□□□□ -0.01
Stag1Q9D3E6 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Stag1Q9D3E6 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC15.01□□□□□ -0.01
Stag1Q9D3E6 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Stag1Q9D3E6 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Stag1Q9D3E6 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Stag1Q9D3E6 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC15.01□□□□□ -0.01
Stag1Q9D3E6 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Stag1Q9D3E6 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Stag1Q9D3E6 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Stag1Q9D3E6 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Stag1Q9D3E6 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Stag1Q9D3E6 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC15□□□□□ -0.01
Stag1Q9D3E6 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Stag1Q9D3E6 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Stag1Q9D3E6 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Stag1Q9D3E6 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Stag1Q9D3E6 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Stag1Q9D3E6 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Stag1Q9D3E6 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC15□□□□□ -0.01
Stag1Q9D3E6 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Stag1Q9D3E6 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Stag1Q9D3E6 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC15□□□□□ -0.01
Stag1Q9D3E6 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Stag1Q9D3E6 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC15□□□□□ -0.01
Stag1Q9D3E6 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC15□□□□□ -0.01
Stag1Q9D3E6 Gm8494-201ENSMUST00000178171 1233 ntBASIC15□□□□□ -0.01
Stag1Q9D3E6 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC15□□□□□ -0.01
Stag1Q9D3E6 Gm28450-201ENSMUST00000187349 638 ntBASIC15□□□□□ -0.01
Stag1Q9D3E6 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC15□□□□□ -0.01
Stag1Q9D3E6 Gm32999-201ENSMUST00000192693 562 ntBASIC15□□□□□ -0.01
Stag1Q9D3E6 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC15□□□□□ -0.01
Stag1Q9D3E6 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC15□□□□□ -0.01
Stag1Q9D3E6 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Stag1Q9D3E6 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC15□□□□□ -0.01
Stag1Q9D3E6 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC15□□□□□ -0.01
Stag1Q9D3E6 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Stag1Q9D3E6 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Stag1Q9D3E6 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Stag1Q9D3E6 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms