Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Chaf1bQ9D0N7 Gm16202-201ENSMUST00000117532 544 ntBASIC11.84□□□□□ -0.51
Chaf1bQ9D0N7 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.84□□□□□ -0.51
Chaf1bQ9D0N7 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.84□□□□□ -0.51
Chaf1bQ9D0N7 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Chaf1bQ9D0N7 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Chaf1bQ9D0N7 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC11.84□□□□□ -0.51
Chaf1bQ9D0N7 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chaf1bQ9D0N7 Gm7730-201ENSMUST00000212486 454 ntBASIC11.84□□□□□ -0.51
Chaf1bQ9D0N7 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Chaf1bQ9D0N7 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chaf1bQ9D0N7 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chaf1bQ9D0N7 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chaf1bQ9D0N7 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chaf1bQ9D0N7 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.84□□□□□ -0.51
Chaf1bQ9D0N7 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chaf1bQ9D0N7 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chaf1bQ9D0N7 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chaf1bQ9D0N7 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chaf1bQ9D0N7 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Chaf1bQ9D0N7 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chaf1bQ9D0N7 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chaf1bQ9D0N7 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Chaf1bQ9D0N7 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chaf1bQ9D0N7 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chaf1bQ9D0N7 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chaf1bQ9D0N7 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Chaf1bQ9D0N7 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Chaf1bQ9D0N7 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.83□□□□□ -0.51
Chaf1bQ9D0N7 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
Chaf1bQ9D0N7 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chaf1bQ9D0N7 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chaf1bQ9D0N7 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Chaf1bQ9D0N7 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chaf1bQ9D0N7 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Chaf1bQ9D0N7 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chaf1bQ9D0N7 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
Chaf1bQ9D0N7 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chaf1bQ9D0N7 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Chaf1bQ9D0N7 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chaf1bQ9D0N7 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chaf1bQ9D0N7 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chaf1bQ9D0N7 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.83□□□□□ -0.52
Chaf1bQ9D0N7 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chaf1bQ9D0N7 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Chaf1bQ9D0N7 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Chaf1bQ9D0N7 Gm14350-201ENSMUST00000116642 640 ntBASIC11.83□□□□□ -0.52
Chaf1bQ9D0N7 Gm13813-201ENSMUST00000120998 787 ntBASIC11.83□□□□□ -0.52
Chaf1bQ9D0N7 Gm12151-201ENSMUST00000121374 290 ntBASIC11.83□□□□□ -0.52
Chaf1bQ9D0N7 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Chaf1bQ9D0N7 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.83□□□□□ -0.52
Chaf1bQ9D0N7 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Chaf1bQ9D0N7 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.83□□□□□ -0.52
Chaf1bQ9D0N7 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.83□□□□□ -0.52
Chaf1bQ9D0N7 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chaf1bQ9D0N7 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Chaf1bQ9D0N7 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Chaf1bQ9D0N7 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.83□□□□□ -0.52
Chaf1bQ9D0N7 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Chaf1bQ9D0N7 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chaf1bQ9D0N7 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Chaf1bQ9D0N7 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.83□□□□□ -0.52
Chaf1bQ9D0N7 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.83□□□□□ -0.52
Chaf1bQ9D0N7 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chaf1bQ9D0N7 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chaf1bQ9D0N7 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Chaf1bQ9D0N7 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.83□□□□□ -0.52
Chaf1bQ9D0N7 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chaf1bQ9D0N7 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chaf1bQ9D0N7 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chaf1bQ9D0N7 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chaf1bQ9D0N7 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chaf1bQ9D0N7 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 Map1b-203ENSMUST00000223725 2669 ntBASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 Gm16342-201ENSMUST00000124025 1025 ntBASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 Gm27306-201ENSMUST00000183970 107 ntBASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Chaf1bQ9D0N7 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms