Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.5□□□□□ -0.41
Ssu72Q9CY97 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssu72Q9CY97 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssu72Q9CY97 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.5□□□□□ -0.41
Ssu72Q9CY97 Gm24136-201ENSMUST00000083374 165 ntBASIC12.5□□□□□ -0.41
Ssu72Q9CY97 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssu72Q9CY97 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ssu72Q9CY97 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ssu72Q9CY97 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.5□□□□□ -0.41
Ssu72Q9CY97 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Ssu72Q9CY97 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.5□□□□□ -0.41
Ssu72Q9CY97 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ssu72Q9CY97 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ssu72Q9CY97 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ssu72Q9CY97 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ssu72Q9CY97 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssu72Q9CY97 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssu72Q9CY97 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssu72Q9CY97 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ssu72Q9CY97 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssu72Q9CY97 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssu72Q9CY97 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ssu72Q9CY97 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ssu72Q9CY97 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssu72Q9CY97 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssu72Q9CY97 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssu72Q9CY97 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssu72Q9CY97 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssu72Q9CY97 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssu72Q9CY97 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssu72Q9CY97 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssu72Q9CY97 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssu72Q9CY97 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ssu72Q9CY97 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssu72Q9CY97 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ssu72Q9CY97 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.49□□□□□ -0.41
Ssu72Q9CY97 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.49□□□□□ -0.41
Ssu72Q9CY97 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssu72Q9CY97 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssu72Q9CY97 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ssu72Q9CY97 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ssu72Q9CY97 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssu72Q9CY97 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.49□□□□□ -0.41
Ssu72Q9CY97 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ssu72Q9CY97 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssu72Q9CY97 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssu72Q9CY97 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
Ssu72Q9CY97 Gm11637-201ENSMUST00000120601 592 ntBASIC12.49□□□□□ -0.41
Ssu72Q9CY97 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.49□□□□□ -0.41
Ssu72Q9CY97 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.49□□□□□ -0.41
Ssu72Q9CY97 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.49□□□□□ -0.41
Ssu72Q9CY97 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ssu72Q9CY97 Gm44882-201ENSMUST00000205702 802 ntBASIC12.49□□□□□ -0.41
Ssu72Q9CY97 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.49□□□□□ -0.41
Ssu72Q9CY97 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.49□□□□□ -0.41
Ssu72Q9CY97 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssu72Q9CY97 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ssu72Q9CY97 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssu72Q9CY97 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.49□□□□□ -0.41
Ssu72Q9CY97 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssu72Q9CY97 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssu72Q9CY97 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Ssu72Q9CY97 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssu72Q9CY97 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.49□□□□□ -0.41
Ssu72Q9CY97 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssu72Q9CY97 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssu72Q9CY97 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssu72Q9CY97 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ssu72Q9CY97 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ssu72Q9CY97 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.49□□□□□ -0.41
Ssu72Q9CY97 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.48□□□□□ -0.41
Ssu72Q9CY97 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssu72Q9CY97 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ssu72Q9CY97 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ssu72Q9CY97 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssu72Q9CY97 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ssu72Q9CY97 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Ssu72Q9CY97 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ssu72Q9CY97 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ssu72Q9CY97 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.48□□□□□ -0.41
Ssu72Q9CY97 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.48□□□□□ -0.41
Ssu72Q9CY97 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssu72Q9CY97 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.48□□□□□ -0.41
Ssu72Q9CY97 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ssu72Q9CY97 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.48□□□□□ -0.41
Ssu72Q9CY97 Snord83b-201ENSMUST00000104546 94 ntBASIC12.48□□□□□ -0.41
Ssu72Q9CY97 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssu72Q9CY97 Gm12151-201ENSMUST00000121374 290 ntBASIC12.48□□□□□ -0.41
Ssu72Q9CY97 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ssu72Q9CY97 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssu72Q9CY97 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Ssu72Q9CY97 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ssu72Q9CY97 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.48□□□□□ -0.41
Ssu72Q9CY97 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ssu72Q9CY97 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.48□□□□□ -0.41
Ssu72Q9CY97 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.48□□□□□ -0.41
Ssu72Q9CY97 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.48□□□□□ -0.41
Ssu72Q9CY97 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ssu72Q9CY97 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ssu72Q9CY97 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms