Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ssr1Q9CY50 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ssr1Q9CY50 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.75□□□□□ -0.21
Ssr1Q9CY50 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.75□□□□□ -0.21
Ssr1Q9CY50 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.75□□□□□ -0.21
Ssr1Q9CY50 Gm6152-201ENSMUST00000151704 340 ntBASIC13.75□□□□□ -0.21
Ssr1Q9CY50 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Ssr1Q9CY50 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ssr1Q9CY50 Gm16372-201ENSMUST00000073088 450 ntBASIC13.75□□□□□ -0.21
Ssr1Q9CY50 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ssr1Q9CY50 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ssr1Q9CY50 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ssr1Q9CY50 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ssr1Q9CY50 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ssr1Q9CY50 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ssr1Q9CY50 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ssr1Q9CY50 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ssr1Q9CY50 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ssr1Q9CY50 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ssr1Q9CY50 Gm37368-201ENSMUST00000193173 3212 ntBASIC13.75□□□□□ -0.21
Ssr1Q9CY50 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.75□□□□□ -0.21
Ssr1Q9CY50 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ssr1Q9CY50 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC13.75□□□□□ -0.21
Ssr1Q9CY50 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ssr1Q9CY50 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ssr1Q9CY50 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.75□□□□□ -0.21
Ssr1Q9CY50 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Ssr1Q9CY50 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ssr1Q9CY50 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.74□□□□□ -0.21
Ssr1Q9CY50 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ssr1Q9CY50 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ssr1Q9CY50 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.74□□□□□ -0.21
Ssr1Q9CY50 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
Ssr1Q9CY50 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ssr1Q9CY50 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.74□□□□□ -0.21
Ssr1Q9CY50 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.74□□□□□ -0.21
Ssr1Q9CY50 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.74□□□□□ -0.21
Ssr1Q9CY50 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Ssr1Q9CY50 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.74□□□□□ -0.21
Ssr1Q9CY50 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.74□□□□□ -0.21
Ssr1Q9CY50 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.74□□□□□ -0.21
Ssr1Q9CY50 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.74□□□□□ -0.21
Ssr1Q9CY50 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.74□□□□□ -0.21
Ssr1Q9CY50 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.74□□□□□ -0.21
Ssr1Q9CY50 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Ssr1Q9CY50 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ssr1Q9CY50 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Ssr1Q9CY50 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.74□□□□□ -0.21
Ssr1Q9CY50 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ssr1Q9CY50 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ssr1Q9CY50 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ssr1Q9CY50 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ssr1Q9CY50 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ssr1Q9CY50 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ssr1Q9CY50 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.74□□□□□ -0.21
Ssr1Q9CY50 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Ssr1Q9CY50 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Ssr1Q9CY50 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ssr1Q9CY50 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ssr1Q9CY50 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.74□□□□□ -0.21
Ssr1Q9CY50 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ssr1Q9CY50 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ssr1Q9CY50 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Ssr1Q9CY50 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssr1Q9CY50 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ssr1Q9CY50 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssr1Q9CY50 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssr1Q9CY50 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Ssr1Q9CY50 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Ssr1Q9CY50 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssr1Q9CY50 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ssr1Q9CY50 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssr1Q9CY50 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssr1Q9CY50 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssr1Q9CY50 Gm12928-201ENSMUST00000117115 573 ntBASIC13.73□□□□□ -0.21
Ssr1Q9CY50 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.73□□□□□ -0.21
Ssr1Q9CY50 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.73□□□□□ -0.21
Ssr1Q9CY50 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ssr1Q9CY50 Gm44069-201ENSMUST00000204898 506 ntBASIC13.73□□□□□ -0.21
Ssr1Q9CY50 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.73□□□□□ -0.21
Ssr1Q9CY50 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssr1Q9CY50 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssr1Q9CY50 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssr1Q9CY50 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Ssr1Q9CY50 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssr1Q9CY50 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssr1Q9CY50 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssr1Q9CY50 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssr1Q9CY50 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssr1Q9CY50 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssr1Q9CY50 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssr1Q9CY50 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssr1Q9CY50 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssr1Q9CY50 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ssr1Q9CY50 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Ssr1Q9CY50 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.73□□□□□ -0.21
Ssr1Q9CY50 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ssr1Q9CY50 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssr1Q9CY50 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.73□□□□□ -0.21
Ssr1Q9CY50 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms