Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx47Q9CWX9 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx47Q9CWX9 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx47Q9CWX9 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx47Q9CWX9 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx47Q9CWX9 Gm14350-201ENSMUST00000116642 640 ntBASIC12.95□□□□□ -0.34
Ddx47Q9CWX9 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx47Q9CWX9 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx47Q9CWX9 Gm6458-201ENSMUST00000211573 635 ntBASIC12.95□□□□□ -0.34
Ddx47Q9CWX9 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.95□□□□□ -0.34
Ddx47Q9CWX9 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.95□□□□□ -0.34
Ddx47Q9CWX9 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx47Q9CWX9 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ddx47Q9CWX9 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx47Q9CWX9 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx47Q9CWX9 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.95□□□□□ -0.34
Ddx47Q9CWX9 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx47Q9CWX9 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ddx47Q9CWX9 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx47Q9CWX9 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx47Q9CWX9 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx47Q9CWX9 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx47Q9CWX9 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx47Q9CWX9 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx47Q9CWX9 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx47Q9CWX9 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Ddx47Q9CWX9 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx47Q9CWX9 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.95□□□□□ -0.34
Ddx47Q9CWX9 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ddx47Q9CWX9 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx47Q9CWX9 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx47Q9CWX9 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.95□□□□□ -0.34
Ddx47Q9CWX9 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx47Q9CWX9 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 Gm21854-201ENSMUST00000179901 471 ntBASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 Gm17837-201ENSMUST00000186435 985 ntBASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 Mir339-201ENSMUST00000083659 96 ntBASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.94□□□□□ -0.34
Ddx47Q9CWX9 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx47Q9CWX9 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx47Q9CWX9 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.93□□□□□ -0.34
Ddx47Q9CWX9 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Ddx47Q9CWX9 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx47Q9CWX9 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx47Q9CWX9 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx47Q9CWX9 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.93□□□□□ -0.34
Ddx47Q9CWX9 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Ddx47Q9CWX9 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.93□□□□□ -0.34
Ddx47Q9CWX9 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx47Q9CWX9 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx47Q9CWX9 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.93□□□□□ -0.34
Ddx47Q9CWX9 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx47Q9CWX9 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms