Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Khdc3Q9CWU5 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.11□□□□□ -0.47
Khdc3Q9CWU5 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Khdc3Q9CWU5 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.11□□□□□ -0.47
Khdc3Q9CWU5 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.11□□□□□ -0.47
Khdc3Q9CWU5 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Khdc3Q9CWU5 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Khdc3Q9CWU5 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Khdc3Q9CWU5 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Khdc3Q9CWU5 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Khdc3Q9CWU5 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Khdc3Q9CWU5 Snord83b-201ENSMUST00000104546 94 ntBASIC12.11□□□□□ -0.47
Khdc3Q9CWU5 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Khdc3Q9CWU5 Gm14921-201ENSMUST00000118643 908 ntBASIC12.11□□□□□ -0.47
Khdc3Q9CWU5 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.11□□□□□ -0.47
Khdc3Q9CWU5 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Khdc3Q9CWU5 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Khdc3Q9CWU5 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Khdc3Q9CWU5 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Khdc3Q9CWU5 Gm27682-201ENSMUST00000183930 110 ntBASIC12.11□□□□□ -0.47
Khdc3Q9CWU5 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.11□□□□□ -0.47
Khdc3Q9CWU5 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Khdc3Q9CWU5 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.11□□□□□ -0.47
Khdc3Q9CWU5 Gm40466-201ENSMUST00000212174 422 ntBASIC12.11□□□□□ -0.47
Khdc3Q9CWU5 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Khdc3Q9CWU5 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.11□□□□□ -0.47
Khdc3Q9CWU5 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Khdc3Q9CWU5 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.11□□□□□ -0.47
Khdc3Q9CWU5 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Khdc3Q9CWU5 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Khdc3Q9CWU5 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Khdc3Q9CWU5 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Khdc3Q9CWU5 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Khdc3Q9CWU5 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Khdc3Q9CWU5 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Khdc3Q9CWU5 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.11□□□□□ -0.47
Khdc3Q9CWU5 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Khdc3Q9CWU5 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Khdc3Q9CWU5 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Khdc3Q9CWU5 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Khdc3Q9CWU5 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Khdc3Q9CWU5 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Khdc3Q9CWU5 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Khdc3Q9CWU5 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.1□□□□□ -0.47
Khdc3Q9CWU5 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Khdc3Q9CWU5 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Khdc3Q9CWU5 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Khdc3Q9CWU5 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Khdc3Q9CWU5 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Khdc3Q9CWU5 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.1□□□□□ -0.47
Khdc3Q9CWU5 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Khdc3Q9CWU5 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Khdc3Q9CWU5 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.1□□□□□ -0.47
Khdc3Q9CWU5 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Khdc3Q9CWU5 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Khdc3Q9CWU5 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Khdc3Q9CWU5 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Khdc3Q9CWU5 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Khdc3Q9CWU5 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Khdc3Q9CWU5 Gm1335-201ENSMUST00000121653 386 ntBASIC12.1□□□□□ -0.47
Khdc3Q9CWU5 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.1□□□□□ -0.47
Khdc3Q9CWU5 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Khdc3Q9CWU5 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Khdc3Q9CWU5 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Khdc3Q9CWU5 Gm6266-201ENSMUST00000203844 806 ntBASIC12.1□□□□□ -0.47
Khdc3Q9CWU5 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.1□□□□□ -0.47
Khdc3Q9CWU5 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Khdc3Q9CWU5 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Khdc3Q9CWU5 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Khdc3Q9CWU5 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Khdc3Q9CWU5 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Khdc3Q9CWU5 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Khdc3Q9CWU5 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.1□□□□□ -0.47
Khdc3Q9CWU5 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.1□□□□□ -0.47
Khdc3Q9CWU5 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Khdc3Q9CWU5 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Khdc3Q9CWU5 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Khdc3Q9CWU5 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Khdc3Q9CWU5 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Khdc3Q9CWU5 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Khdc3Q9CWU5 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Khdc3Q9CWU5 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Khdc3Q9CWU5 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Khdc3Q9CWU5 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.1□□□□□ -0.47
Khdc3Q9CWU5 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.1□□□□□ -0.47
Khdc3Q9CWU5 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Khdc3Q9CWU5 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.1□□□□□ -0.47
Khdc3Q9CWU5 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Khdc3Q9CWU5 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.09□□□□□ -0.47
Khdc3Q9CWU5 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Khdc3Q9CWU5 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Khdc3Q9CWU5 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Khdc3Q9CWU5 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Khdc3Q9CWU5 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Khdc3Q9CWU5 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Khdc3Q9CWU5 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Khdc3Q9CWU5 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.09□□□□□ -0.47
Khdc3Q9CWU5 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Khdc3Q9CWU5 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Khdc3Q9CWU5 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms