Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RTRAFQ9CQE8 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.23□□□□□ -0.77
RTRAFQ9CQE8 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
RTRAFQ9CQE8 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC10.23□□□□□ -0.77
RTRAFQ9CQE8 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.23□□□□□ -0.77
RTRAFQ9CQE8 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC10.23□□□□□ -0.77
RTRAFQ9CQE8 AC160410.1-201ENSMUST00000219298 1972 ntBASIC10.23□□□□□ -0.77
RTRAFQ9CQE8 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
RTRAFQ9CQE8 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Gm4913-201ENSMUST00000117075 1290 ntBASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Gm8410-201ENSMUST00000117225 605 ntBASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Gm12585-201ENSMUST00000117307 290 ntBASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Gm12428-201ENSMUST00000119844 727 ntBASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Gm14730-201ENSMUST00000122378 1045 ntBASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Gm24158-201ENSMUST00000175263 71 ntBASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Gm43125-201ENSMUST00000201724 730 ntBASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Gm7498-201ENSMUST00000203282 1084 ntBASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Gm18905-201ENSMUST00000205454 928 ntBASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 AC122305.4-201ENSMUST00000216159 1206 ntBASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Gm44094-201ENSMUST00000204703 2030 ntBASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Gm13517-201ENSMUST00000120782 1495 ntBASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
RTRAFQ9CQE8 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
RTRAFQ9CQE8 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.77
RTRAFQ9CQE8 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
RTRAFQ9CQE8 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
RTRAFQ9CQE8 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
RTRAFQ9CQE8 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
RTRAFQ9CQE8 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
RTRAFQ9CQE8 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
RTRAFQ9CQE8 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
RTRAFQ9CQE8 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
RTRAFQ9CQE8 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
RTRAFQ9CQE8 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.77
RTRAFQ9CQE8 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
RTRAFQ9CQE8 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.21□□□□□ -0.77
RTRAFQ9CQE8 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
RTRAFQ9CQE8 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
RTRAFQ9CQE8 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.77
RTRAFQ9CQE8 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
RTRAFQ9CQE8 Gm12537-201ENSMUST00000119266 1002 ntBASIC10.21□□□□□ -0.77
RTRAFQ9CQE8 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC10.21□□□□□ -0.77
RTRAFQ9CQE8 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC10.21□□□□□ -0.77
RTRAFQ9CQE8 Gm12070-201ENSMUST00000119551 1002 ntBASIC10.21□□□□□ -0.77
RTRAFQ9CQE8 Gm12671-201ENSMUST00000119978 1002 ntBASIC10.21□□□□□ -0.77
RTRAFQ9CQE8 Gm13292-201ENSMUST00000120014 1000 ntBASIC10.21□□□□□ -0.77
RTRAFQ9CQE8 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC10.21□□□□□ -0.77
RTRAFQ9CQE8 Gm13365-201ENSMUST00000121188 973 ntBASIC10.21□□□□□ -0.77
RTRAFQ9CQE8 Gm12403-201ENSMUST00000121384 959 ntBASIC10.21□□□□□ -0.77
RTRAFQ9CQE8 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC10.21□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms