Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Cdh23Q99PF4 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh23Q99PF4 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.48□□□□□ -0.41
Cdh23Q99PF4 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh23Q99PF4 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Cdh23Q99PF4 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC12.48□□□□□ -0.41
Cdh23Q99PF4 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC12.48□□□□□ -0.41
Cdh23Q99PF4 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.48□□□□□ -0.41
Cdh23Q99PF4 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Cdh23Q99PF4 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh23Q99PF4 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh23Q99PF4 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Cdh23Q99PF4 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Cdh23Q99PF4 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.48□□□□□ -0.41
Cdh23Q99PF4 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh23Q99PF4 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh23Q99PF4 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.48□□□□□ -0.41
Cdh23Q99PF4 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh23Q99PF4 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh23Q99PF4 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh23Q99PF4 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.48□□□□□ -0.41
Cdh23Q99PF4 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Cdh23Q99PF4 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh23Q99PF4 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh23Q99PF4 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh23Q99PF4 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.47□□□□□ -0.41
Cdh23Q99PF4 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cdh23Q99PF4 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC12.47□□□□□ -0.41
Cdh23Q99PF4 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Cdh23Q99PF4 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Cdh23Q99PF4 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh23Q99PF4 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Cdh23Q99PF4 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh23Q99PF4 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.47□□□□□ -0.41
Cdh23Q99PF4 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Cdh23Q99PF4 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh23Q99PF4 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh23Q99PF4 Gm23255-201ENSMUST00000102244 110 ntBASIC12.47□□□□□ -0.41
Cdh23Q99PF4 Gm23272-201ENSMUST00000104053 129 ntBASIC12.47□□□□□ -0.41
Cdh23Q99PF4 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC12.47□□□□□ -0.41
Cdh23Q99PF4 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC12.47□□□□□ -0.41
Cdh23Q99PF4 Gm19931-201ENSMUST00000198920 368 ntBASIC12.47□□□□□ -0.41
Cdh23Q99PF4 Gm43854-201ENSMUST00000200418 394 ntBASIC12.47□□□□□ -0.41
Cdh23Q99PF4 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh23Q99PF4 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh23Q99PF4 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh23Q99PF4 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.47□□□□□ -0.41
Cdh23Q99PF4 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh23Q99PF4 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh23Q99PF4 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh23Q99PF4 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh23Q99PF4 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh23Q99PF4 Gm13286-201ENSMUST00000117750 537 ntBASIC12.47□□□□□ -0.41
Cdh23Q99PF4 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.47□□□□□ -0.41
Cdh23Q99PF4 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh23Q99PF4 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cdh23Q99PF4 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh23Q99PF4 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh23Q99PF4 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh23Q99PF4 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh23Q99PF4 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh23Q99PF4 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cdh23Q99PF4 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh23Q99PF4 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh23Q99PF4 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh23Q99PF4 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh23Q99PF4 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh23Q99PF4 Gm25053-201ENSMUST00000103982 133 ntBASIC12.46□□□□□ -0.41
Cdh23Q99PF4 Gm25922-201ENSMUST00000104281 130 ntBASIC12.46□□□□□ -0.41
Cdh23Q99PF4 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh23Q99PF4 Gm6322-201ENSMUST00000118789 1004 ntBASIC12.46□□□□□ -0.41
Cdh23Q99PF4 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh23Q99PF4 Gm22442-201ENSMUST00000157256 144 ntBASIC12.46□□□□□ -0.41
Cdh23Q99PF4 Gm24679-201ENSMUST00000158762 111 ntBASIC12.46□□□□□ -0.41
Cdh23Q99PF4 Gm25053-202ENSMUST00000199731 132 ntBASIC12.46□□□□□ -0.41
Cdh23Q99PF4 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC12.46□□□□□ -0.41
Cdh23Q99PF4 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh23Q99PF4 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh23Q99PF4 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh23Q99PF4 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh23Q99PF4 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh23Q99PF4 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh23Q99PF4 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh23Q99PF4 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh23Q99PF4 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh23Q99PF4 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh23Q99PF4 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh23Q99PF4 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Cdh23Q99PF4 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC12.46□□□□□ -0.41
Cdh23Q99PF4 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Cdh23Q99PF4 Gm12453-201ENSMUST00000121981 331 ntBASIC12.46□□□□□ -0.41
Cdh23Q99PF4 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.46□□□□□ -0.41
Cdh23Q99PF4 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.46□□□□□ -0.41
Cdh23Q99PF4 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.46□□□□□ -0.41
Cdh23Q99PF4 Gm28686-201ENSMUST00000187404 609 ntBASIC12.46□□□□□ -0.41
Cdh23Q99PF4 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC12.46□□□□□ -0.41
Cdh23Q99PF4 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC12.46□□□□□ -0.41
Cdh23Q99PF4 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Cdh23Q99PF4 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Cdh23Q99PF4 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms