Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.55□□□□□ -0.24
Tlr3Q99MB1 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC13.55□□□□□ -0.24
Tlr3Q99MB1 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.55□□□□□ -0.24
Tlr3Q99MB1 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.55□□□□□ -0.24
Tlr3Q99MB1 Gm25261-201ENSMUST00000157416 134 ntBASIC13.55□□□□□ -0.24
Tlr3Q99MB1 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tlr3Q99MB1 Gm7584-201ENSMUST00000175829 940 ntBASIC13.55□□□□□ -0.24
Tlr3Q99MB1 Gm6222-202ENSMUST00000182143 629 ntBASIC13.55□□□□□ -0.24
Tlr3Q99MB1 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.55□□□□□ -0.24
Tlr3Q99MB1 Gm7783-201ENSMUST00000204795 781 ntBASIC13.55□□□□□ -0.24
Tlr3Q99MB1 Gm18935-201ENSMUST00000212692 664 ntBASIC13.55□□□□□ -0.24
Tlr3Q99MB1 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.55□□□□□ -0.24
Tlr3Q99MB1 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.55□□□□□ -0.24
Tlr3Q99MB1 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Tlr3Q99MB1 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tlr3Q99MB1 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Tlr3Q99MB1 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tlr3Q99MB1 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tlr3Q99MB1 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Tlr3Q99MB1 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tlr3Q99MB1 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tlr3Q99MB1 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Tlr3Q99MB1 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tlr3Q99MB1 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tlr3Q99MB1 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tlr3Q99MB1 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tlr3Q99MB1 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Tlr3Q99MB1 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tlr3Q99MB1 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tlr3Q99MB1 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tlr3Q99MB1 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tlr3Q99MB1 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Tlr3Q99MB1 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tlr3Q99MB1 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tlr3Q99MB1 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.54□□□□□ -0.24
Tlr3Q99MB1 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tlr3Q99MB1 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tlr3Q99MB1 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Tlr3Q99MB1 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Tlr3Q99MB1 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.54□□□□□ -0.24
Tlr3Q99MB1 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.54□□□□□ -0.24
Tlr3Q99MB1 Gm16379-201ENSMUST00000161469 348 ntBASIC13.54□□□□□ -0.24
Tlr3Q99MB1 Mir8109-201ENSMUST00000184375 117 ntBASIC13.54□□□□□ -0.24
Tlr3Q99MB1 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Tlr3Q99MB1 Gm8762-201ENSMUST00000193486 339 ntBASIC13.54□□□□□ -0.24
Tlr3Q99MB1 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Tlr3Q99MB1 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.54□□□□□ -0.24
Tlr3Q99MB1 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.54□□□□□ -0.24
Tlr3Q99MB1 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Tlr3Q99MB1 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Tlr3Q99MB1 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tlr3Q99MB1 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Tlr3Q99MB1 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Tlr3Q99MB1 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.54□□□□□ -0.24
Tlr3Q99MB1 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tlr3Q99MB1 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.54□□□□□ -0.24
Tlr3Q99MB1 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tlr3Q99MB1 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Tlr3Q99MB1 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tlr3Q99MB1 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tlr3Q99MB1 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Tlr3Q99MB1 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Tlr3Q99MB1 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tlr3Q99MB1 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tlr3Q99MB1 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tlr3Q99MB1 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tlr3Q99MB1 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tlr3Q99MB1 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tlr3Q99MB1 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tlr3Q99MB1 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tlr3Q99MB1 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.53□□□□□ -0.24
Tlr3Q99MB1 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tlr3Q99MB1 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Tlr3Q99MB1 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tlr3Q99MB1 Gm22018-201ENSMUST00000104357 131 ntBASIC13.53□□□□□ -0.24
Tlr3Q99MB1 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.53□□□□□ -0.24
Tlr3Q99MB1 Gm7809-201ENSMUST00000153199 742 ntBASIC13.53□□□□□ -0.24
Tlr3Q99MB1 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tlr3Q99MB1 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tlr3Q99MB1 Gm9368-201ENSMUST00000219348 831 ntBASIC13.53□□□□□ -0.24
Tlr3Q99MB1 Gm45930-201ENSMUST00000221330 292 ntBASIC13.53□□□□□ -0.24
Tlr3Q99MB1 AC154532.1-201ENSMUST00000227860 965 ntBASIC13.53□□□□□ -0.24
Tlr3Q99MB1 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tlr3Q99MB1 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Tlr3Q99MB1 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tlr3Q99MB1 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tlr3Q99MB1 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tlr3Q99MB1 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.53□□□□□ -0.24
Tlr3Q99MB1 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tlr3Q99MB1 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Tlr3Q99MB1 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tlr3Q99MB1 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tlr3Q99MB1 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tlr3Q99MB1 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tlr3Q99MB1 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tlr3Q99MB1 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tlr3Q99MB1 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tlr3Q99MB1 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tlr3Q99MB1 Gm37660-201ENSMUST00000192754 1732 ntBASIC13.53□□□□□ -0.24
Tlr3Q99MB1 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms