Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Gm29649-201ENSMUST00000185649 419 ntBASIC11.95□□□□□ -0.5
Chmp1b1Q99LU0 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.95□□□□□ -0.5
Chmp1b1Q99LU0 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.95□□□□□ -0.5
Chmp1b1Q99LU0 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.95□□□□□ -0.5
Chmp1b1Q99LU0 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.95□□□□□ -0.5
Chmp1b1Q99LU0 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp1b1Q99LU0 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp1b1Q99LU0 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp1b1Q99LU0 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp1b1Q99LU0 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp1b1Q99LU0 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp1b1Q99LU0 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp1b1Q99LU0 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp1b1Q99LU0 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp1b1Q99LU0 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.95□□□□□ -0.5
Chmp1b1Q99LU0 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 Gm24644-201ENSMUST00000157114 139 ntBASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 Gm25857-201ENSMUST00000082788 129 ntBASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp1b1Q99LU0 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Gm10146-201ENSMUST00000072739 309 ntBASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms