Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lims1Q99JW4 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lims1Q99JW4 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lims1Q99JW4 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lims1Q99JW4 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Lims1Q99JW4 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Lims1Q99JW4 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lims1Q99JW4 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.49□□□□□ -0.57
Lims1Q99JW4 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.49□□□□□ -0.57
Lims1Q99JW4 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.49□□□□□ -0.57
Lims1Q99JW4 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Lims1Q99JW4 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lims1Q99JW4 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Lims1Q99JW4 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lims1Q99JW4 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lims1Q99JW4 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Lims1Q99JW4 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lims1Q99JW4 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lims1Q99JW4 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Lims1Q99JW4 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Lims1Q99JW4 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lims1Q99JW4 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.49□□□□□ -0.57
Lims1Q99JW4 Gm15824-201ENSMUST00000119516 955 ntBASIC11.49□□□□□ -0.57
Lims1Q99JW4 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.49□□□□□ -0.57
Lims1Q99JW4 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lims1Q99JW4 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lims1Q99JW4 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.49□□□□□ -0.57
Lims1Q99JW4 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.49□□□□□ -0.57
Lims1Q99JW4 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.49□□□□□ -0.57
Lims1Q99JW4 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Lims1Q99JW4 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lims1Q99JW4 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.49□□□□□ -0.57
Lims1Q99JW4 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lims1Q99JW4 Gm37497-201ENSMUST00000195830 798 ntBASIC11.49□□□□□ -0.57
Lims1Q99JW4 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lims1Q99JW4 Gm32025-201ENSMUST00000217960 307 ntBASIC11.49□□□□□ -0.57
Lims1Q99JW4 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Lims1Q99JW4 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lims1Q99JW4 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Lims1Q99JW4 Gm15163-201ENSMUST00000120749 1302 ntBASIC11.49□□□□□ -0.57
Lims1Q99JW4 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Lims1Q99JW4 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lims1Q99JW4 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lims1Q99JW4 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lims1Q99JW4 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lims1Q99JW4 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lims1Q99JW4 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.49□□□□□ -0.57
Lims1Q99JW4 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.49□□□□□ -0.57
Lims1Q99JW4 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lims1Q99JW4 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lims1Q99JW4 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Lims1Q99JW4 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lims1Q99JW4 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lims1Q99JW4 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lims1Q99JW4 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lims1Q99JW4 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lims1Q99JW4 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lims1Q99JW4 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Lims1Q99JW4 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lims1Q99JW4 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Lims1Q99JW4 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lims1Q99JW4 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.48□□□□□ -0.57
Lims1Q99JW4 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Lims1Q99JW4 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lims1Q99JW4 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Lims1Q99JW4 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lims1Q99JW4 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lims1Q99JW4 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lims1Q99JW4 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC11.48□□□□□ -0.57
Lims1Q99JW4 Gm2231-201ENSMUST00000125661 612 ntBASIC11.48□□□□□ -0.57
Lims1Q99JW4 Gm8810-201ENSMUST00000172895 754 ntBASIC11.48□□□□□ -0.57
Lims1Q99JW4 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Lims1Q99JW4 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.48□□□□□ -0.57
Lims1Q99JW4 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.48□□□□□ -0.57
Lims1Q99JW4 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.48□□□□□ -0.57
Lims1Q99JW4 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lims1Q99JW4 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.48□□□□□ -0.57
Lims1Q99JW4 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lims1Q99JW4 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Lims1Q99JW4 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.48□□□□□ -0.57
Lims1Q99JW4 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lims1Q99JW4 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.48□□□□□ -0.57
Lims1Q99JW4 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lims1Q99JW4 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.48□□□□□ -0.57
Lims1Q99JW4 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lims1Q99JW4 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.48□□□□□ -0.57
Lims1Q99JW4 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Lims1Q99JW4 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.48□□□□□ -0.57
Lims1Q99JW4 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Lims1Q99JW4 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lims1Q99JW4 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lims1Q99JW4 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lims1Q99JW4 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Lims1Q99JW4 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lims1Q99JW4 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lims1Q99JW4 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lims1Q99JW4 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Lims1Q99JW4 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lims1Q99JW4 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Lims1Q99JW4 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms