Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdha3Q91Y16 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.21□□□□□ -0.29
Pcdha3Q91Y16 Gm11591-201ENSMUST00000120063 702 ntBASIC13.21□□□□□ -0.29
Pcdha3Q91Y16 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.21□□□□□ -0.29
Pcdha3Q91Y16 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.21□□□□□ -0.29
Pcdha3Q91Y16 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.21□□□□□ -0.29
Pcdha3Q91Y16 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.21□□□□□ -0.29
Pcdha3Q91Y16 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.21□□□□□ -0.29
Pcdha3Q91Y16 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Pcdha3Q91Y16 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.21□□□□□ -0.29
Pcdha3Q91Y16 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.21□□□□□ -0.29
Pcdha3Q91Y16 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdha3Q91Y16 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdha3Q91Y16 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Pcdha3Q91Y16 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.21□□□□□ -0.29
Pcdha3Q91Y16 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdha3Q91Y16 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Pcdha3Q91Y16 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdha3Q91Y16 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdha3Q91Y16 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.21□□□□□ -0.3
Pcdha3Q91Y16 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdha3Q91Y16 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdha3Q91Y16 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.21□□□□□ -0.3
Pcdha3Q91Y16 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdha3Q91Y16 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdha3Q91Y16 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdha3Q91Y16 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.21□□□□□ -0.3
Pcdha3Q91Y16 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdha3Q91Y16 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 Snord83b-201ENSMUST00000104546 94 ntBASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 Gm25261-201ENSMUST00000157416 134 ntBASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 Gm43133-201ENSMUST00000197472 463 ntBASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 Gm19309-201ENSMUST00000218295 205 ntBASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdha3Q91Y16 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdha3Q91Y16 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdha3Q91Y16 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdha3Q91Y16 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdha3Q91Y16 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdha3Q91Y16 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdha3Q91Y16 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdha3Q91Y16 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdha3Q91Y16 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdha3Q91Y16 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Pcdha3Q91Y16 Gm22018-201ENSMUST00000104357 131 ntBASIC13.19□□□□□ -0.3
Pcdha3Q91Y16 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdha3Q91Y16 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.19□□□□□ -0.3
Pcdha3Q91Y16 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Pcdha3Q91Y16 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdha3Q91Y16 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdha3Q91Y16 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdha3Q91Y16 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdha3Q91Y16 Gm18054-201ENSMUST00000207539 555 ntBASIC13.19□□□□□ -0.3
Pcdha3Q91Y16 Gm32025-201ENSMUST00000217960 307 ntBASIC13.19□□□□□ -0.3
Pcdha3Q91Y16 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdha3Q91Y16 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms