Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha9Q91Y11 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha9Q91Y11 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha9Q91Y11 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.4□□□□□ -0.26
Pcdha9Q91Y11 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Pcdha9Q91Y11 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha9Q91Y11 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha9Q91Y11 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha9Q91Y11 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.4□□□□□ -0.26
Pcdha9Q91Y11 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha9Q91Y11 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha9Q91Y11 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha9Q91Y11 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha9Q91Y11 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha9Q91Y11 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Pcdha9Q91Y11 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
Pcdha9Q91Y11 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
Pcdha9Q91Y11 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Pcdha9Q91Y11 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Pcdha9Q91Y11 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha9Q91Y11 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha9Q91Y11 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha9Q91Y11 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha9Q91Y11 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha9Q91Y11 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha9Q91Y11 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Pcdha9Q91Y11 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha9Q91Y11 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Pcdha9Q91Y11 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha9Q91Y11 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.39□□□□□ -0.27
Pcdha9Q91Y11 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha9Q91Y11 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha9Q91Y11 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Pcdha9Q91Y11 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha9Q91Y11 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha9Q91Y11 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha9Q91Y11 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.39□□□□□ -0.27
Pcdha9Q91Y11 Gm6007-201ENSMUST00000208170 823 ntBASIC13.39□□□□□ -0.27
Pcdha9Q91Y11 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Pcdha9Q91Y11 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.39□□□□□ -0.27
Pcdha9Q91Y11 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha9Q91Y11 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha9Q91Y11 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdha9Q91Y11 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha9Q91Y11 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdha9Q91Y11 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha9Q91Y11 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha9Q91Y11 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha9Q91Y11 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha9Q91Y11 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha9Q91Y11 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha9Q91Y11 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha9Q91Y11 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha9Q91Y11 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha9Q91Y11 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha9Q91Y11 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.39□□□□□ -0.27
Pcdha9Q91Y11 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha9Q91Y11 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Gm13297-201ENSMUST00000120205 934 ntBASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Gm27023-201ENSMUST00000182372 285 ntBASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Gm27501-201ENSMUST00000183599 107 ntBASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Gm27243-201ENSMUST00000183964 521 ntBASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Gm18304-201ENSMUST00000189162 546 ntBASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Gm10608-202ENSMUST00000213924 676 ntBASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Gm7399-201ENSMUST00000032395 858 ntBASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Gm9899-201ENSMUST00000065519 555 ntBASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Gm10076-201ENSMUST00000073238 384 ntBASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Gm24136-201ENSMUST00000083374 165 ntBASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha9Q91Y11 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms