Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.78□□□□□ -0.36
Pcdhb3Q91XZ7 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb3Q91XZ7 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.78□□□□□ -0.36
Pcdhb3Q91XZ7 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.78□□□□□ -0.36
Pcdhb3Q91XZ7 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb3Q91XZ7 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb3Q91XZ7 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb3Q91XZ7 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb3Q91XZ7 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb3Q91XZ7 Gm14579-201ENSMUST00000117068 283 ntBASIC12.78□□□□□ -0.36
Pcdhb3Q91XZ7 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.78□□□□□ -0.36
Pcdhb3Q91XZ7 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.78□□□□□ -0.36
Pcdhb3Q91XZ7 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.78□□□□□ -0.36
Pcdhb3Q91XZ7 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.78□□□□□ -0.36
Pcdhb3Q91XZ7 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.78□□□□□ -0.36
Pcdhb3Q91XZ7 Gm28439-201ENSMUST00000187714 876 ntBASIC12.78□□□□□ -0.36
Pcdhb3Q91XZ7 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb3Q91XZ7 Gm8190-201ENSMUST00000199603 586 ntBASIC12.78□□□□□ -0.36
Pcdhb3Q91XZ7 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.78□□□□□ -0.36
Pcdhb3Q91XZ7 Gm44124-201ENSMUST00000204159 472 ntBASIC12.78□□□□□ -0.36
Pcdhb3Q91XZ7 Gm45668-201ENSMUST00000211271 493 ntBASIC12.78□□□□□ -0.36
Pcdhb3Q91XZ7 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.78□□□□□ -0.36
Pcdhb3Q91XZ7 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.78□□□□□ -0.36
Pcdhb3Q91XZ7 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb3Q91XZ7 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Pcdhb3Q91XZ7 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Pcdhb3Q91XZ7 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.78□□□□□ -0.36
Pcdhb3Q91XZ7 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb3Q91XZ7 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb3Q91XZ7 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb3Q91XZ7 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb3Q91XZ7 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.78□□□□□ -0.36
Pcdhb3Q91XZ7 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.78□□□□□ -0.36
Pcdhb3Q91XZ7 Gm42479-201ENSMUST00000198654 1356 ntBASIC12.78□□□□□ -0.36
Pcdhb3Q91XZ7 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb3Q91XZ7 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb3Q91XZ7 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb3Q91XZ7 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb3Q91XZ7 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb3Q91XZ7 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb3Q91XZ7 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
Pcdhb3Q91XZ7 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb3Q91XZ7 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb3Q91XZ7 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb3Q91XZ7 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb3Q91XZ7 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Pcdhb3Q91XZ7 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Pcdhb3Q91XZ7 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.77□□□□□ -0.36
Pcdhb3Q91XZ7 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb3Q91XZ7 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb3Q91XZ7 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb3Q91XZ7 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb3Q91XZ7 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdhb3Q91XZ7 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Pcdhb3Q91XZ7 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb3Q91XZ7 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb3Q91XZ7 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb3Q91XZ7 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb3Q91XZ7 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb3Q91XZ7 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.77□□□□□ -0.37
Pcdhb3Q91XZ7 Gm13505-201ENSMUST00000121666 817 ntBASIC12.77□□□□□ -0.37
Pcdhb3Q91XZ7 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.77□□□□□ -0.37
Pcdhb3Q91XZ7 Gm37751-201ENSMUST00000192440 1198 ntBASIC12.77□□□□□ -0.37
Pcdhb3Q91XZ7 Gm37917-201ENSMUST00000194711 392 ntBASIC12.77□□□□□ -0.37
Pcdhb3Q91XZ7 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.77□□□□□ -0.37
Pcdhb3Q91XZ7 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.77□□□□□ -0.37
Pcdhb3Q91XZ7 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb3Q91XZ7 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.77□□□□□ -0.37
Pcdhb3Q91XZ7 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.77□□□□□ -0.37
Pcdhb3Q91XZ7 Gm6180-201ENSMUST00000065243 498 ntBASIC12.77□□□□□ -0.37
Pcdhb3Q91XZ7 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Pcdhb3Q91XZ7 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Pcdhb3Q91XZ7 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.37
Pcdhb3Q91XZ7 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.77□□□□□ -0.37
Pcdhb3Q91XZ7 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb3Q91XZ7 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb3Q91XZ7 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb3Q91XZ7 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb3Q91XZ7 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb3Q91XZ7 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb3Q91XZ7 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb3Q91XZ7 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb3Q91XZ7 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Pcdhb3Q91XZ7 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb3Q91XZ7 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb3Q91XZ7 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb3Q91XZ7 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb3Q91XZ7 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb3Q91XZ7 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb3Q91XZ7 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Pcdhb3Q91XZ7 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb3Q91XZ7 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb3Q91XZ7 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb3Q91XZ7 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdhb3Q91XZ7 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb3Q91XZ7 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb3Q91XZ7 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb3Q91XZ7 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdhb3Q91XZ7 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb3Q91XZ7 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms