Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trex1Q91XB0 Gm12380-201ENSMUST00000119012 544 ntBASIC14.41□□□□□ -0.1
Trex1Q91XB0 Gm12266-201ENSMUST00000120311 962 ntBASIC14.41□□□□□ -0.1
Trex1Q91XB0 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC14.41□□□□□ -0.1
Trex1Q91XB0 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC14.41□□□□□ -0.1
Trex1Q91XB0 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trex1Q91XB0 Gm43378-201ENSMUST00000199336 582 ntBASIC14.41□□□□□ -0.1
Trex1Q91XB0 Gm43947-201ENSMUST00000203019 959 ntBASIC14.41□□□□□ -0.1
Trex1Q91XB0 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trex1Q91XB0 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trex1Q91XB0 Gm45342-201ENSMUST00000210903 1363 ntBASIC14.41□□□□□ -0.1
Trex1Q91XB0 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trex1Q91XB0 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trex1Q91XB0 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trex1Q91XB0 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trex1Q91XB0 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trex1Q91XB0 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trex1Q91XB0 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trex1Q91XB0 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trex1Q91XB0 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trex1Q91XB0 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trex1Q91XB0 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trex1Q91XB0 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trex1Q91XB0 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trex1Q91XB0 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC14.4□□□□□ -0.1
Trex1Q91XB0 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trex1Q91XB0 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trex1Q91XB0 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Trex1Q91XB0 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trex1Q91XB0 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Trex1Q91XB0 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trex1Q91XB0 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trex1Q91XB0 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trex1Q91XB0 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trex1Q91XB0 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC14.4□□□□□ -0.1
Trex1Q91XB0 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC14.4□□□□□ -0.1
Trex1Q91XB0 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC14.4□□□□□ -0.1
Trex1Q91XB0 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC14.4□□□□□ -0.1
Trex1Q91XB0 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC14.4□□□□□ -0.1
Trex1Q91XB0 Gm27627-201ENSMUST00000183644 150 ntBASIC14.4□□□□□ -0.1
Trex1Q91XB0 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC14.4□□□□□ -0.1
Trex1Q91XB0 Gm10371-202ENSMUST00000228010 1081 ntBASIC14.4□□□□□ -0.1
Trex1Q91XB0 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trex1Q91XB0 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Trex1Q91XB0 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trex1Q91XB0 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trex1Q91XB0 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trex1Q91XB0 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trex1Q91XB0 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Trex1Q91XB0 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trex1Q91XB0 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.4□□□□□ -0.1
Trex1Q91XB0 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trex1Q91XB0 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.4□□□□□ -0.1
Trex1Q91XB0 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trex1Q91XB0 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC14.39□□□□□ -0.11
Trex1Q91XB0 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trex1Q91XB0 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trex1Q91XB0 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trex1Q91XB0 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trex1Q91XB0 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trex1Q91XB0 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trex1Q91XB0 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC14.39□□□□□ -0.11
Trex1Q91XB0 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trex1Q91XB0 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trex1Q91XB0 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trex1Q91XB0 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trex1Q91XB0 Gm5616-201ENSMUST00000165252 384 ntBASIC14.39□□□□□ -0.11
Trex1Q91XB0 Gm8741-201ENSMUST00000174736 384 ntBASIC14.39□□□□□ -0.11
Trex1Q91XB0 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
Trex1Q91XB0 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC14.39□□□□□ -0.11
Trex1Q91XB0 AY036118-201ENSMUST00000200021 923 ntBASIC14.39□□□□□ -0.11
Trex1Q91XB0 AU022133-201ENSMUST00000200601 873 ntBASIC14.39□□□□□ -0.11
Trex1Q91XB0 Gm21027-201ENSMUST00000219300 1236 ntBASIC14.39□□□□□ -0.11
Trex1Q91XB0 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trex1Q91XB0 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trex1Q91XB0 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.39□□□□□ -0.11
Trex1Q91XB0 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trex1Q91XB0 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trex1Q91XB0 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.39□□□□□ -0.11
Trex1Q91XB0 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trex1Q91XB0 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trex1Q91XB0 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trex1Q91XB0 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trex1Q91XB0 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trex1Q91XB0 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC14.38□□□□□ -0.11
Trex1Q91XB0 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trex1Q91XB0 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trex1Q91XB0 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trex1Q91XB0 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Trex1Q91XB0 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Trex1Q91XB0 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trex1Q91XB0 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trex1Q91XB0 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trex1Q91XB0 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trex1Q91XB0 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC14.38□□□□□ -0.11
Trex1Q91XB0 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trex1Q91XB0 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trex1Q91XB0 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trex1Q91XB0 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trex1Q91XB0 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms