Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.21□□□□□ -0.46
Pcdh18Q8VHR0 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh18Q8VHR0 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh18Q8VHR0 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh18Q8VHR0 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh18Q8VHR0 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh18Q8VHR0 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh18Q8VHR0 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 Gm7063-201ENSMUST00000186840 981 ntBASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Pcdh18Q8VHR0 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh18Q8VHR0 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh18Q8VHR0 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh18Q8VHR0 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Pcdh18Q8VHR0 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Pcdh18Q8VHR0 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh18Q8VHR0 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh18Q8VHR0 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh18Q8VHR0 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh18Q8VHR0 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh18Q8VHR0 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh18Q8VHR0 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh18Q8VHR0 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Pcdh18Q8VHR0 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh18Q8VHR0 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Pcdh18Q8VHR0 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.19□□□□□ -0.46
Pcdh18Q8VHR0 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.19□□□□□ -0.46
Pcdh18Q8VHR0 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh18Q8VHR0 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh18Q8VHR0 Gm29608-201ENSMUST00000190444 463 ntBASIC12.19□□□□□ -0.46
Pcdh18Q8VHR0 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Pcdh18Q8VHR0 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.19□□□□□ -0.46
Pcdh18Q8VHR0 Gm19220-201ENSMUST00000222682 803 ntBASIC12.19□□□□□ -0.46
Pcdh18Q8VHR0 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.19□□□□□ -0.46
Pcdh18Q8VHR0 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh18Q8VHR0 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh18Q8VHR0 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh18Q8VHR0 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.19□□□□□ -0.46
Pcdh18Q8VHR0 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh18Q8VHR0 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh18Q8VHR0 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh18Q8VHR0 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh18Q8VHR0 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh18Q8VHR0 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh18Q8VHR0 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh18Q8VHR0 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh18Q8VHR0 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Pcdh18Q8VHR0 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh18Q8VHR0 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh18Q8VHR0 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Pcdh18Q8VHR0 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms