Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Rpa1Q8VEE4 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rpa1Q8VEE4 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rpa1Q8VEE4 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rpa1Q8VEE4 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rpa1Q8VEE4 Gm11524-201ENSMUST00000119349 807 ntBASIC12.75□□□□□ -0.37
Rpa1Q8VEE4 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rpa1Q8VEE4 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rpa1Q8VEE4 Gm13813-201ENSMUST00000120998 787 ntBASIC12.75□□□□□ -0.37
Rpa1Q8VEE4 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.75□□□□□ -0.37
Rpa1Q8VEE4 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.75□□□□□ -0.37
Rpa1Q8VEE4 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.75□□□□□ -0.37
Rpa1Q8VEE4 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.75□□□□□ -0.37
Rpa1Q8VEE4 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rpa1Q8VEE4 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rpa1Q8VEE4 Gm9630-201ENSMUST00000178304 885 ntBASIC12.75□□□□□ -0.37
Rpa1Q8VEE4 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rpa1Q8VEE4 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.75□□□□□ -0.37
Rpa1Q8VEE4 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rpa1Q8VEE4 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rpa1Q8VEE4 Gm19184-201ENSMUST00000196798 928 ntBASIC12.75□□□□□ -0.37
Rpa1Q8VEE4 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rpa1Q8VEE4 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rpa1Q8VEE4 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rpa1Q8VEE4 Gm7775-201ENSMUST00000218871 853 ntBASIC12.75□□□□□ -0.37
Rpa1Q8VEE4 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.75□□□□□ -0.37
Rpa1Q8VEE4 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.75□□□□□ -0.37
Rpa1Q8VEE4 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rpa1Q8VEE4 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rpa1Q8VEE4 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rpa1Q8VEE4 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rpa1Q8VEE4 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rpa1Q8VEE4 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rpa1Q8VEE4 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Rpa1Q8VEE4 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Rpa1Q8VEE4 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rpa1Q8VEE4 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rpa1Q8VEE4 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Rpa1Q8VEE4 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rpa1Q8VEE4 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rpa1Q8VEE4 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rpa1Q8VEE4 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rpa1Q8VEE4 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.74□□□□□ -0.37
Rpa1Q8VEE4 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rpa1Q8VEE4 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rpa1Q8VEE4 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.74□□□□□ -0.37
Rpa1Q8VEE4 Gm11978-201ENSMUST00000122315 466 ntBASIC12.74□□□□□ -0.37
Rpa1Q8VEE4 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rpa1Q8VEE4 Gm27306-201ENSMUST00000183970 107 ntBASIC12.74□□□□□ -0.37
Rpa1Q8VEE4 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rpa1Q8VEE4 Gm43377-201ENSMUST00000201640 455 ntBASIC12.74□□□□□ -0.37
Rpa1Q8VEE4 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.74□□□□□ -0.37
Rpa1Q8VEE4 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rpa1Q8VEE4 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.74□□□□□ -0.37
Rpa1Q8VEE4 AC155266.1-201ENSMUST00000220762 904 ntBASIC12.74□□□□□ -0.37
Rpa1Q8VEE4 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rpa1Q8VEE4 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.74□□□□□ -0.37
Rpa1Q8VEE4 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rpa1Q8VEE4 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rpa1Q8VEE4 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rpa1Q8VEE4 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rpa1Q8VEE4 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rpa1Q8VEE4 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rpa1Q8VEE4 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Rpa1Q8VEE4 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rpa1Q8VEE4 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rpa1Q8VEE4 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rpa1Q8VEE4 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Rpa1Q8VEE4 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.74□□□□□ -0.37
Rpa1Q8VEE4 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Rpa1Q8VEE4 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rpa1Q8VEE4 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.73□□□□□ -0.37
Rpa1Q8VEE4 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa1Q8VEE4 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa1Q8VEE4 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa1Q8VEE4 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa1Q8VEE4 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa1Q8VEE4 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa1Q8VEE4 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.73□□□□□ -0.37
Rpa1Q8VEE4 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa1Q8VEE4 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa1Q8VEE4 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa1Q8VEE4 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa1Q8VEE4 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa1Q8VEE4 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms