Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ndc1Q8VCB1 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ndc1Q8VCB1 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ndc1Q8VCB1 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ndc1Q8VCB1 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ndc1Q8VCB1 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ndc1Q8VCB1 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.93□□□□□ -0.5
Ndc1Q8VCB1 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ndc1Q8VCB1 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ndc1Q8VCB1 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ndc1Q8VCB1 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ndc1Q8VCB1 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ndc1Q8VCB1 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ndc1Q8VCB1 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ndc1Q8VCB1 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Ndc1Q8VCB1 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Mir877-201ENSMUST00000104738 85 ntBASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Gm11222-201ENSMUST00000119005 738 ntBASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Gm17376-201ENSMUST00000166016 84 ntBASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Gm18056-201ENSMUST00000207670 568 ntBASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Gm18061-201ENSMUST00000208350 562 ntBASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Gm18063-201ENSMUST00000208529 568 ntBASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Gm18052-201ENSMUST00000208750 559 ntBASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Ndc1Q8VCB1 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ndc1Q8VCB1 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ndc1Q8VCB1 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.91□□□□□ -0.5
Ndc1Q8VCB1 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ndc1Q8VCB1 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ndc1Q8VCB1 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
Ndc1Q8VCB1 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ndc1Q8VCB1 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ndc1Q8VCB1 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ndc1Q8VCB1 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ndc1Q8VCB1 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ndc1Q8VCB1 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ndc1Q8VCB1 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ndc1Q8VCB1 Gm15808-201ENSMUST00000119046 604 ntBASIC11.91□□□□□ -0.5
Ndc1Q8VCB1 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.91□□□□□ -0.5
Ndc1Q8VCB1 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.91□□□□□ -0.5
Ndc1Q8VCB1 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.91□□□□□ -0.5
Ndc1Q8VCB1 Gm6082-201ENSMUST00000215204 454 ntBASIC11.91□□□□□ -0.5
Ndc1Q8VCB1 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.91□□□□□ -0.5
Ndc1Q8VCB1 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.91□□□□□ -0.5
Ndc1Q8VCB1 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ndc1Q8VCB1 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ndc1Q8VCB1 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.91□□□□□ -0.5
Ndc1Q8VCB1 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ndc1Q8VCB1 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ndc1Q8VCB1 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ndc1Q8VCB1 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.91□□□□□ -0.5
Ndc1Q8VCB1 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms