Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Lsm1Q8VC85 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm1Q8VC85 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.11□□□□□ -0.47
Lsm1Q8VC85 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm1Q8VC85 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Lsm1Q8VC85 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm1Q8VC85 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Lsm1Q8VC85 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.11□□□□□ -0.47
Lsm1Q8VC85 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm1Q8VC85 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Lsm1Q8VC85 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.11□□□□□ -0.47
Lsm1Q8VC85 Gm32025-201ENSMUST00000217960 307 ntBASIC12.11□□□□□ -0.47
Lsm1Q8VC85 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Lsm1Q8VC85 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm1Q8VC85 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm1Q8VC85 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Lsm1Q8VC85 Gm5356-201ENSMUST00000093326 615 ntBASIC12.11□□□□□ -0.47
Lsm1Q8VC85 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm1Q8VC85 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm1Q8VC85 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm1Q8VC85 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm1Q8VC85 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm1Q8VC85 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm1Q8VC85 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.11□□□□□ -0.47
Lsm1Q8VC85 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm1Q8VC85 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm1Q8VC85 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm1Q8VC85 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm1Q8VC85 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm1Q8VC85 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Lsm1Q8VC85 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm1Q8VC85 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm1Q8VC85 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm1Q8VC85 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm1Q8VC85 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm1Q8VC85 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.1□□□□□ -0.47
Lsm1Q8VC85 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.1□□□□□ -0.47
Lsm1Q8VC85 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm1Q8VC85 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.1□□□□□ -0.47
Lsm1Q8VC85 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Lsm1Q8VC85 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.1□□□□□ -0.47
Lsm1Q8VC85 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm1Q8VC85 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm1Q8VC85 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Lsm1Q8VC85 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm1Q8VC85 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm1Q8VC85 Gm11814-201ENSMUST00000119515 929 ntBASIC12.1□□□□□ -0.47
Lsm1Q8VC85 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.1□□□□□ -0.47
Lsm1Q8VC85 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm1Q8VC85 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.1□□□□□ -0.47
Lsm1Q8VC85 Gm8652-201ENSMUST00000181363 964 ntBASIC12.1□□□□□ -0.47
Lsm1Q8VC85 Gm27331-201ENSMUST00000183705 60 ntBASIC12.1□□□□□ -0.47
Lsm1Q8VC85 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.1□□□□□ -0.47
Lsm1Q8VC85 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.1□□□□□ -0.47
Lsm1Q8VC85 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.1□□□□□ -0.47
Lsm1Q8VC85 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm1Q8VC85 Gm17794-201ENSMUST00000220252 955 ntBASIC12.1□□□□□ -0.47
Lsm1Q8VC85 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm1Q8VC85 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm1Q8VC85 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm1Q8VC85 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm1Q8VC85 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm1Q8VC85 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm1Q8VC85 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm1Q8VC85 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm1Q8VC85 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm1Q8VC85 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm1Q8VC85 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm1Q8VC85 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.1□□□□□ -0.47
Lsm1Q8VC85 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm1Q8VC85 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.1□□□□□ -0.47
Lsm1Q8VC85 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm1Q8VC85 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm1Q8VC85 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm1Q8VC85 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm1Q8VC85 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm1Q8VC85 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm1Q8VC85 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Lsm1Q8VC85 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Lsm1Q8VC85 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm1Q8VC85 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm1Q8VC85 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.09□□□□□ -0.47
Lsm1Q8VC85 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm1Q8VC85 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm1Q8VC85 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm1Q8VC85 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.09□□□□□ -0.47
Lsm1Q8VC85 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.09□□□□□ -0.47
Lsm1Q8VC85 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm1Q8VC85 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm1Q8VC85 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm1Q8VC85 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm1Q8VC85 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm1Q8VC85 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lsm1Q8VC85 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Lsm1Q8VC85 Gm12138-201ENSMUST00000122180 951 ntBASIC12.09□□□□□ -0.47
Lsm1Q8VC85 Gm12363-201ENSMUST00000122250 668 ntBASIC12.09□□□□□ -0.47
Lsm1Q8VC85 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.09□□□□□ -0.47
Lsm1Q8VC85 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.09□□□□□ -0.47
Lsm1Q8VC85 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.09□□□□□ -0.47
Lsm1Q8VC85 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms