Protein–RNA interactions for Protein: Q8R5K2

Usp33, Ubiquitin carboxyl-terminal hydrolase 33, mousemouse

Predictions only

Length 909 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp33Q8R5K2 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp33Q8R5K2 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp33Q8R5K2 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Usp33Q8R5K2 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.54□□□□□ -0.08
Usp33Q8R5K2 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Usp33Q8R5K2 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Usp33Q8R5K2 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Usp33Q8R5K2 Gm7467-201ENSMUST00000185173 652 ntBASIC14.54□□□□□ -0.08
Usp33Q8R5K2 Gm28882-201ENSMUST00000185504 314 ntBASIC14.54□□□□□ -0.08
Usp33Q8R5K2 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC14.54□□□□□ -0.08
Usp33Q8R5K2 AC107638.1-201ENSMUST00000213690 1061 ntBASIC14.54□□□□□ -0.08
Usp33Q8R5K2 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp33Q8R5K2 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp33Q8R5K2 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp33Q8R5K2 Gm43081-201ENSMUST00000199082 1380 ntBASIC14.54□□□□□ -0.08
Usp33Q8R5K2 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Usp33Q8R5K2 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Usp33Q8R5K2 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Usp33Q8R5K2 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Usp33Q8R5K2 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Usp33Q8R5K2 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.54□□□□□ -0.08
Usp33Q8R5K2 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.54□□□□□ -0.08
Usp33Q8R5K2 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp33Q8R5K2 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp33Q8R5K2 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC14.54□□□□□ -0.08
Usp33Q8R5K2 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp33Q8R5K2 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp33Q8R5K2 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp33Q8R5K2 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp33Q8R5K2 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Usp33Q8R5K2 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp33Q8R5K2 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp33Q8R5K2 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.53□□□□□ -0.08
Usp33Q8R5K2 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Usp33Q8R5K2 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC14.53□□□□□ -0.08
Usp33Q8R5K2 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp33Q8R5K2 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC14.53□□□□□ -0.08
Usp33Q8R5K2 AC122197.2-201ENSMUST00000219196 1635 ntBASIC14.53□□□□□ -0.08
Usp33Q8R5K2 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC14.53□□□□□ -0.08
Usp33Q8R5K2 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp33Q8R5K2 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp33Q8R5K2 Gm9062-201ENSMUST00000117712 727 ntBASIC14.53□□□□□ -0.08
Usp33Q8R5K2 Gm14921-201ENSMUST00000118643 908 ntBASIC14.53□□□□□ -0.08
Usp33Q8R5K2 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC14.53□□□□□ -0.08
Usp33Q8R5K2 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Usp33Q8R5K2 Gm29615-201ENSMUST00000185371 697 ntBASIC14.53□□□□□ -0.08
Usp33Q8R5K2 Gm28224-201ENSMUST00000186078 697 ntBASIC14.53□□□□□ -0.08
Usp33Q8R5K2 Gm29001-201ENSMUST00000186177 697 ntBASIC14.53□□□□□ -0.08
Usp33Q8R5K2 Gm28292-201ENSMUST00000186593 697 ntBASIC14.53□□□□□ -0.08
Usp33Q8R5K2 Gm28101-201ENSMUST00000187608 697 ntBASIC14.53□□□□□ -0.08
Usp33Q8R5K2 Gm29076-201ENSMUST00000187689 697 ntBASIC14.53□□□□□ -0.08
Usp33Q8R5K2 Gm28302-201ENSMUST00000187931 697 ntBASIC14.53□□□□□ -0.08
Usp33Q8R5K2 Gm28646-201ENSMUST00000188220 697 ntBASIC14.53□□□□□ -0.08
Usp33Q8R5K2 Gm28205-201ENSMUST00000189177 697 ntBASIC14.53□□□□□ -0.08
Usp33Q8R5K2 Gm29032-201ENSMUST00000189797 697 ntBASIC14.53□□□□□ -0.08
Usp33Q8R5K2 Gm28695-201ENSMUST00000190300 697 ntBASIC14.53□□□□□ -0.08
Usp33Q8R5K2 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Usp33Q8R5K2 Gm37448-201ENSMUST00000192795 697 ntBASIC14.53□□□□□ -0.08
Usp33Q8R5K2 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC14.53□□□□□ -0.08
Usp33Q8R5K2 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC14.53□□□□□ -0.08
Usp33Q8R5K2 Dhrs4-202ENSMUST00000226168 828 ntBASIC14.53□□□□□ -0.08
Usp33Q8R5K2 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp33Q8R5K2 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Usp33Q8R5K2 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Usp33Q8R5K2 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp33Q8R5K2 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp33Q8R5K2 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp33Q8R5K2 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp33Q8R5K2 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Usp33Q8R5K2 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp33Q8R5K2 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp33Q8R5K2 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.53□□□□□ -0.08
Usp33Q8R5K2 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp33Q8R5K2 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp33Q8R5K2 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Usp33Q8R5K2 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.52□□□□□ -0.08
Usp33Q8R5K2 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Usp33Q8R5K2 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Usp33Q8R5K2 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Usp33Q8R5K2 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Usp33Q8R5K2 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Usp33Q8R5K2 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Usp33Q8R5K2 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Usp33Q8R5K2 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Usp33Q8R5K2 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Usp33Q8R5K2 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Usp33Q8R5K2 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Usp33Q8R5K2 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC14.52□□□□□ -0.08
Usp33Q8R5K2 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.52□□□□□ -0.08
Usp33Q8R5K2 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Usp33Q8R5K2 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Usp33Q8R5K2 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Usp33Q8R5K2 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC14.52□□□□□ -0.09
Usp33Q8R5K2 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC14.52□□□□□ -0.09
Usp33Q8R5K2 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC14.52□□□□□ -0.09
Usp33Q8R5K2 Gm16296-201ENSMUST00000159905 325 ntBASIC14.52□□□□□ -0.09
Usp33Q8R5K2 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC14.52□□□□□ -0.09
Usp33Q8R5K2 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
Usp33Q8R5K2 Gm37835-201ENSMUST00000193305 361 ntBASIC14.52□□□□□ -0.09
Usp33Q8R5K2 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms