Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Top1mtQ8R4U6 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Top1mtQ8R4U6 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Top1mtQ8R4U6 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Top1mtQ8R4U6 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Top1mtQ8R4U6 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Top1mtQ8R4U6 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Top1mtQ8R4U6 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Top1mtQ8R4U6 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Top1mtQ8R4U6 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC15.06■□□□□ 0
Top1mtQ8R4U6 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Top1mtQ8R4U6 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC15.06■□□□□ 0
Top1mtQ8R4U6 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Top1mtQ8R4U6 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Top1mtQ8R4U6 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC15.06■□□□□ 0
Top1mtQ8R4U6 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Top1mtQ8R4U6 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Top1mtQ8R4U6 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC15.06■□□□□ 0
Top1mtQ8R4U6 Rmrp-201ENSMUST00000157463 271 ntBASIC15.06■□□□□ 0
Top1mtQ8R4U6 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC15.06■□□□□ 0
Top1mtQ8R4U6 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC15.06■□□□□ 0
Top1mtQ8R4U6 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Top1mtQ8R4U6 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC15.06■□□□□ 0
Top1mtQ8R4U6 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC15.06■□□□□ 0
Top1mtQ8R4U6 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC15.06■□□□□ 0
Top1mtQ8R4U6 AL732506.1-201ENSMUST00000226420 281 ntBASIC15.06■□□□□ 0
Top1mtQ8R4U6 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Top1mtQ8R4U6 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Top1mtQ8R4U6 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Top1mtQ8R4U6 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Top1mtQ8R4U6 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC15.06■□□□□ 0
Top1mtQ8R4U6 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Top1mtQ8R4U6 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Top1mtQ8R4U6 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Top1mtQ8R4U6 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Top1mtQ8R4U6 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC15.06■□□□□ 0
Top1mtQ8R4U6 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC15.06■□□□□ 0
Top1mtQ8R4U6 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Top1mtQ8R4U6 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Top1mtQ8R4U6 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC15.06■□□□□ 0
Top1mtQ8R4U6 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC15.06■□□□□ 0
Top1mtQ8R4U6 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Top1mtQ8R4U6 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC15.05■□□□□ 0
Top1mtQ8R4U6 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC15.05■□□□□ 0
Top1mtQ8R4U6 Gm44414-201ENSMUST00000203660 2109 ntBASIC15.05■□□□□ 0
Top1mtQ8R4U6 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Top1mtQ8R4U6 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Top1mtQ8R4U6 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Top1mtQ8R4U6 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC15.05■□□□□ 0
Top1mtQ8R4U6 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Top1mtQ8R4U6 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC15.05■□□□□ -0
Top1mtQ8R4U6 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC15.05■□□□□ -0
Top1mtQ8R4U6 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC15.05■□□□□ -0
Top1mtQ8R4U6 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Top1mtQ8R4U6 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC15.05■□□□□ -0
Top1mtQ8R4U6 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC15.05■□□□□ -0
Top1mtQ8R4U6 Gm27514-201ENSMUST00000183692 110 ntBASIC15.05■□□□□ -0
Top1mtQ8R4U6 Gm45484-201ENSMUST00000210310 1141 ntBASIC15.05■□□□□ -0
Top1mtQ8R4U6 Gm5781-201ENSMUST00000219792 443 ntBASIC15.05■□□□□ -0
Top1mtQ8R4U6 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC15.05■□□□□ -0
Top1mtQ8R4U6 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC15.05■□□□□ -0
Top1mtQ8R4U6 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Top1mtQ8R4U6 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC15.05■□□□□ -0
Top1mtQ8R4U6 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Top1mtQ8R4U6 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Top1mtQ8R4U6 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC15.05■□□□□ -0
Top1mtQ8R4U6 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Top1mtQ8R4U6 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC15.05■□□□□ -0
Top1mtQ8R4U6 Gm37437-201ENSMUST00000194451 1937 ntBASIC15.05■□□□□ -0
Top1mtQ8R4U6 Gm43721-201ENSMUST00000199677 2313 ntBASIC15.05■□□□□ -0
Top1mtQ8R4U6 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Top1mtQ8R4U6 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Top1mtQ8R4U6 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Top1mtQ8R4U6 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Top1mtQ8R4U6 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
Top1mtQ8R4U6 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Top1mtQ8R4U6 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Top1mtQ8R4U6 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Top1mtQ8R4U6 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Top1mtQ8R4U6 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Top1mtQ8R4U6 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Top1mtQ8R4U6 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Top1mtQ8R4U6 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Top1mtQ8R4U6 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Top1mtQ8R4U6 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Top1mtQ8R4U6 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Top1mtQ8R4U6 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Top1mtQ8R4U6 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Top1mtQ8R4U6 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC15.04■□□□□ -0
Top1mtQ8R4U6 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Top1mtQ8R4U6 Gm23931-201ENSMUST00000103842 109 ntBASIC15.04■□□□□ -0
Top1mtQ8R4U6 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Top1mtQ8R4U6 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC15.04■□□□□ -0
Top1mtQ8R4U6 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC15.04■□□□□ -0
Top1mtQ8R4U6 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC15.04■□□□□ -0
Top1mtQ8R4U6 Gm8018-201ENSMUST00000173536 789 ntBASIC15.04■□□□□ -0
Top1mtQ8R4U6 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC15.04■□□□□ -0
Top1mtQ8R4U6 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC15.04■□□□□ -0
Top1mtQ8R4U6 Gm5904-201ENSMUST00000210286 865 ntBASIC15.04■□□□□ -0
Top1mtQ8R4U6 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms