Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ubqln1Q8R317 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Ubqln1Q8R317 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ubqln1Q8R317 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ubqln1Q8R317 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ubqln1Q8R317 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ubqln1Q8R317 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ubqln1Q8R317 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.98□□□□□ -0.49
Ubqln1Q8R317 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ubqln1Q8R317 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.98□□□□□ -0.49
Ubqln1Q8R317 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.98□□□□□ -0.49
Ubqln1Q8R317 Gm12742-201ENSMUST00000117326 410 ntBASIC11.98□□□□□ -0.49
Ubqln1Q8R317 Gm13226-201ENSMUST00000117838 404 ntBASIC11.98□□□□□ -0.49
Ubqln1Q8R317 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ubqln1Q8R317 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ubqln1Q8R317 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.98□□□□□ -0.49
Ubqln1Q8R317 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.98□□□□□ -0.49
Ubqln1Q8R317 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.98□□□□□ -0.49
Ubqln1Q8R317 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.98□□□□□ -0.49
Ubqln1Q8R317 Gm24526-201ENSMUST00000082921 158 ntBASIC11.98□□□□□ -0.49
Ubqln1Q8R317 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ubqln1Q8R317 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ubqln1Q8R317 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.98□□□□□ -0.49
Ubqln1Q8R317 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ubqln1Q8R317 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ubqln1Q8R317 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ubqln1Q8R317 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ubqln1Q8R317 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubqln1Q8R317 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubqln1Q8R317 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ubqln1Q8R317 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubqln1Q8R317 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ubqln1Q8R317 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Ubqln1Q8R317 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubqln1Q8R317 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubqln1Q8R317 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ubqln1Q8R317 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.97□□□□□ -0.49
Ubqln1Q8R317 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11.97□□□□□ -0.49
Ubqln1Q8R317 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubqln1Q8R317 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.97□□□□□ -0.49
Ubqln1Q8R317 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.97□□□□□ -0.49
Ubqln1Q8R317 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.97□□□□□ -0.49
Ubqln1Q8R317 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ubqln1Q8R317 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.97□□□□□ -0.49
Ubqln1Q8R317 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubqln1Q8R317 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubqln1Q8R317 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.97□□□□□ -0.49
Ubqln1Q8R317 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ubqln1Q8R317 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubqln1Q8R317 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubqln1Q8R317 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubqln1Q8R317 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubqln1Q8R317 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ubqln1Q8R317 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ubqln1Q8R317 Gm14660-201ENSMUST00000119809 575 ntBASIC11.97□□□□□ -0.49
Ubqln1Q8R317 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ubqln1Q8R317 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubqln1Q8R317 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubqln1Q8R317 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.97□□□□□ -0.49
Ubqln1Q8R317 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ubqln1Q8R317 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.97□□□□□ -0.49
Ubqln1Q8R317 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.97□□□□□ -0.49
Ubqln1Q8R317 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubqln1Q8R317 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubqln1Q8R317 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Ubqln1Q8R317 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.97□□□□□ -0.49
Ubqln1Q8R317 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ubqln1Q8R317 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubqln1Q8R317 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubqln1Q8R317 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ubqln1Q8R317 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubqln1Q8R317 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ubqln1Q8R317 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Ubqln1Q8R317 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ubqln1Q8R317 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubqln1Q8R317 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ubqln1Q8R317 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubqln1Q8R317 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubqln1Q8R317 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ubqln1Q8R317 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ubqln1Q8R317 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ubqln1Q8R317 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Ubqln1Q8R317 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ubqln1Q8R317 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ubqln1Q8R317 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ubqln1Q8R317 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ubqln1Q8R317 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ubqln1Q8R317 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ubqln1Q8R317 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ubqln1Q8R317 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.96□□□□□ -0.49
Ubqln1Q8R317 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ubqln1Q8R317 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.96□□□□□ -0.49
Ubqln1Q8R317 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ubqln1Q8R317 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ubqln1Q8R317 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.96□□□□□ -0.49
Ubqln1Q8R317 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Ubqln1Q8R317 Gm12957-201ENSMUST00000117835 377 ntBASIC11.96□□□□□ -0.49
Ubqln1Q8R317 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.96□□□□□ -0.49
Ubqln1Q8R317 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ubqln1Q8R317 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms