Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC16.09■□□□□ 0.17
Chmp7Q8R1T1 AC153974.2-201ENSMUST00000218577 1025 ntBASIC16.09■□□□□ 0.17
Chmp7Q8R1T1 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp7Q8R1T1 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp7Q8R1T1 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Chmp7Q8R1T1 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Chmp7Q8R1T1 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp7Q8R1T1 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp7Q8R1T1 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp7Q8R1T1 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp7Q8R1T1 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp7Q8R1T1 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp7Q8R1T1 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp7Q8R1T1 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC16.09■□□□□ 0.17
Chmp7Q8R1T1 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Chmp7Q8R1T1 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp7Q8R1T1 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp7Q8R1T1 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp7Q8R1T1 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Chmp7Q8R1T1 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp7Q8R1T1 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp7Q8R1T1 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp7Q8R1T1 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chmp7Q8R1T1 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Chmp7Q8R1T1 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chmp7Q8R1T1 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chmp7Q8R1T1 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC16.08■□□□□ 0.17
Chmp7Q8R1T1 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chmp7Q8R1T1 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chmp7Q8R1T1 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Chmp7Q8R1T1 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp7Q8R1T1 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp7Q8R1T1 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp7Q8R1T1 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
Chmp7Q8R1T1 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC16.08■□□□□ 0.16
Chmp7Q8R1T1 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp7Q8R1T1 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp7Q8R1T1 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
Chmp7Q8R1T1 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp7Q8R1T1 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp7Q8R1T1 Gm12380-201ENSMUST00000119012 544 ntBASIC16.08■□□□□ 0.16
Chmp7Q8R1T1 Gm18734-201ENSMUST00000172937 808 ntBASIC16.08■□□□□ 0.16
Chmp7Q8R1T1 Gm8546-201ENSMUST00000178288 1264 ntBASIC16.08■□□□□ 0.16
Chmp7Q8R1T1 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC16.08■□□□□ 0.16
Chmp7Q8R1T1 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
Chmp7Q8R1T1 Gm5523-201ENSMUST00000180415 997 ntBASIC16.08■□□□□ 0.16
Chmp7Q8R1T1 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp7Q8R1T1 AU022133-201ENSMUST00000200601 873 ntBASIC16.08■□□□□ 0.16
Chmp7Q8R1T1 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC16.08■□□□□ 0.16
Chmp7Q8R1T1 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp7Q8R1T1 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp7Q8R1T1 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp7Q8R1T1 Gm44891-201ENSMUST00000208817 2223 ntBASIC16.08■□□□□ 0.16
Chmp7Q8R1T1 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp7Q8R1T1 Retreg1-206ENSMUST00000228306 1430 ntBASIC16.08■□□□□ 0.16
Chmp7Q8R1T1 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp7Q8R1T1 Gm13142-201ENSMUST00000117213 1453 ntBASIC16.08■□□□□ 0.16
Chmp7Q8R1T1 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp7Q8R1T1 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC16.08■□□□□ 0.16
Chmp7Q8R1T1 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Chmp7Q8R1T1 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp7Q8R1T1 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp7Q8R1T1 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC16.08■□□□□ 0.16
Chmp7Q8R1T1 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp7Q8R1T1 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp7Q8R1T1 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp7Q8R1T1 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp7Q8R1T1 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC16.07■□□□□ 0.16
Chmp7Q8R1T1 Gm15711-201ENSMUST00000118889 535 ntBASIC16.07■□□□□ 0.16
Chmp7Q8R1T1 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp7Q8R1T1 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC16.07■□□□□ 0.16
Chmp7Q8R1T1 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp7Q8R1T1 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
Chmp7Q8R1T1 Gm9022-201ENSMUST00000182482 992 ntBASIC16.07■□□□□ 0.16
Chmp7Q8R1T1 Gm28071-201ENSMUST00000190355 478 ntBASIC16.07■□□□□ 0.16
Chmp7Q8R1T1 Dhrs4-202ENSMUST00000226168 828 ntBASIC16.07■□□□□ 0.16
Chmp7Q8R1T1 AC131330.1-201ENSMUST00000227814 1015 ntBASIC16.07■□□□□ 0.16
Chmp7Q8R1T1 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp7Q8R1T1 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp7Q8R1T1 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp7Q8R1T1 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC16.07■□□□□ 0.16
Chmp7Q8R1T1 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp7Q8R1T1 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp7Q8R1T1 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp7Q8R1T1 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp7Q8R1T1 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC16.07■□□□□ 0.16
Chmp7Q8R1T1 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp7Q8R1T1 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp7Q8R1T1 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC16.07■□□□□ 0.16
Chmp7Q8R1T1 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC16.07■□□□□ 0.16
Chmp7Q8R1T1 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Chmp7Q8R1T1 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp7Q8R1T1 Gm8617-201ENSMUST00000118796 2222 ntBASIC16.07■□□□□ 0.16
Chmp7Q8R1T1 Gm37795-201ENSMUST00000194216 2459 ntBASIC16.07■□□□□ 0.16
Chmp7Q8R1T1 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp7Q8R1T1 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp7Q8R1T1 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp7Q8R1T1 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp7Q8R1T1 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Chmp7Q8R1T1 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms