Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf4Q8K4J2 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf4Q8K4J2 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf4Q8K4J2 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf4Q8K4J2 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf4Q8K4J2 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf4Q8K4J2 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Ebf4Q8K4J2 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 Gm15376-201ENSMUST00000122258 783 ntBASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 Gm26308-201ENSMUST00000157768 69 ntBASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 Gm43094-201ENSMUST00000196549 921 ntBASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ebf4Q8K4J2 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ebf4Q8K4J2 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ebf4Q8K4J2 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ebf4Q8K4J2 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ebf4Q8K4J2 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ebf4Q8K4J2 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Ebf4Q8K4J2 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ebf4Q8K4J2 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ebf4Q8K4J2 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Ebf4Q8K4J2 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.46□□□□□ -0.57
Ebf4Q8K4J2 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ebf4Q8K4J2 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ebf4Q8K4J2 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ebf4Q8K4J2 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ebf4Q8K4J2 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ebf4Q8K4J2 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.46□□□□□ -0.57
Ebf4Q8K4J2 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ebf4Q8K4J2 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.46□□□□□ -0.57
Ebf4Q8K4J2 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Ebf4Q8K4J2 Gm15693-201ENSMUST00000120470 637 ntBASIC11.46□□□□□ -0.57
Ebf4Q8K4J2 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Ebf4Q8K4J2 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC11.46□□□□□ -0.57
Ebf4Q8K4J2 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Ebf4Q8K4J2 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ebf4Q8K4J2 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ebf4Q8K4J2 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.46□□□□□ -0.57
Ebf4Q8K4J2 Gm26315-201ENSMUST00000083890 321 ntBASIC11.46□□□□□ -0.57
Ebf4Q8K4J2 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Ebf4Q8K4J2 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ebf4Q8K4J2 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.46□□□□□ -0.57
Ebf4Q8K4J2 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ebf4Q8K4J2 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ebf4Q8K4J2 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Ebf4Q8K4J2 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.46□□□□□ -0.58
Ebf4Q8K4J2 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ebf4Q8K4J2 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Ebf4Q8K4J2 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ebf4Q8K4J2 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Ebf4Q8K4J2 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ebf4Q8K4J2 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ebf4Q8K4J2 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ebf4Q8K4J2 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ebf4Q8K4J2 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ebf4Q8K4J2 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ebf4Q8K4J2 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms