Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.9□□□□□ -0.5
Clrn1Q8K445 Gm6222-202ENSMUST00000182143 629 ntBASIC11.9□□□□□ -0.5
Clrn1Q8K445 Gm5370-201ENSMUST00000187187 574 ntBASIC11.9□□□□□ -0.5
Clrn1Q8K445 Gm18584-201ENSMUST00000203098 964 ntBASIC11.9□□□□□ -0.5
Clrn1Q8K445 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.9□□□□□ -0.5
Clrn1Q8K445 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.9□□□□□ -0.5
Clrn1Q8K445 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.9□□□□□ -0.5
Clrn1Q8K445 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.9□□□□□ -0.5
Clrn1Q8K445 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.9□□□□□ -0.5
Clrn1Q8K445 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clrn1Q8K445 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.9□□□□□ -0.5
Clrn1Q8K445 Gm24526-201ENSMUST00000082921 158 ntBASIC11.9□□□□□ -0.5
Clrn1Q8K445 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clrn1Q8K445 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clrn1Q8K445 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clrn1Q8K445 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clrn1Q8K445 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clrn1Q8K445 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clrn1Q8K445 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.9□□□□□ -0.51
Clrn1Q8K445 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Clrn1Q8K445 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Clrn1Q8K445 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.89□□□□□ -0.51
Clrn1Q8K445 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clrn1Q8K445 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Cog3-203ENSMUST00000227473 4197 ntBASIC11.89□□□□□ -0.51
Clrn1Q8K445 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Gm13492-201ENSMUST00000119772 665 ntBASIC11.89□□□□□ -0.51
Clrn1Q8K445 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Snora78-201ENSMUST00000158630 128 ntBASIC11.89□□□□□ -0.51
Clrn1Q8K445 Gm16379-201ENSMUST00000161469 348 ntBASIC11.89□□□□□ -0.51
Clrn1Q8K445 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clrn1Q8K445 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Gm8762-201ENSMUST00000193486 339 ntBASIC11.89□□□□□ -0.51
Clrn1Q8K445 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Gm5904-201ENSMUST00000210286 865 ntBASIC11.89□□□□□ -0.51
Clrn1Q8K445 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Clrn1Q8K445 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.89□□□□□ -0.51
Clrn1Q8K445 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Snora73a-201ENSMUST00000082453 205 ntBASIC11.89□□□□□ -0.51
Clrn1Q8K445 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.89□□□□□ -0.51
Clrn1Q8K445 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clrn1Q8K445 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Clrn1Q8K445 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clrn1Q8K445 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clrn1Q8K445 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clrn1Q8K445 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clrn1Q8K445 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.88□□□□□ -0.51
Clrn1Q8K445 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Clrn1Q8K445 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.88□□□□□ -0.51
Clrn1Q8K445 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clrn1Q8K445 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clrn1Q8K445 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Clrn1Q8K445 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clrn1Q8K445 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Clrn1Q8K445 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 122.3 ms