Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Cystm1Q8K353 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Cystm1Q8K353 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Cystm1Q8K353 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Cystm1Q8K353 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Cystm1Q8K353 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
Cystm1Q8K353 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Cystm1Q8K353 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Cystm1Q8K353 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Cystm1Q8K353 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
Cystm1Q8K353 Gm15460-201ENSMUST00000118147 391 ntBASIC7.94□□□□□ -1.14
Cystm1Q8K353 Gm11424-201ENSMUST00000121929 829 ntBASIC7.94□□□□□ -1.14
Cystm1Q8K353 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC7.94□□□□□ -1.14
Cystm1Q8K353 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC7.94□□□□□ -1.14
Cystm1Q8K353 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Cystm1Q8K353 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC7.94□□□□□ -1.14
Cystm1Q8K353 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC7.94□□□□□ -1.14
Cystm1Q8K353 Gm18018-201ENSMUST00000198273 408 ntBASIC7.94□□□□□ -1.14
Cystm1Q8K353 AC165157.4-201ENSMUST00000220587 139 ntBASIC7.94□□□□□ -1.14
Cystm1Q8K353 AC154687.2-201ENSMUST00000223853 640 ntBASIC7.94□□□□□ -1.14
Cystm1Q8K353 AC121598.1-201ENSMUST00000228224 1019 ntBASIC7.94□□□□□ -1.14
Cystm1Q8K353 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Cystm1Q8K353 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Cystm1Q8K353 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Cystm1Q8K353 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Cystm1Q8K353 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Cystm1Q8K353 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Cystm1Q8K353 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Cystm1Q8K353 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Cystm1Q8K353 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Cystm1Q8K353 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Cystm1Q8K353 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Cystm1Q8K353 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Cystm1Q8K353 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
Cystm1Q8K353 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC7.94□□□□□ -1.14
Cystm1Q8K353 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Cystm1Q8K353 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC7.94□□□□□ -1.14
Cystm1Q8K353 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Cystm1Q8K353 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Cystm1Q8K353 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Cystm1Q8K353 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
Cystm1Q8K353 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Cystm1Q8K353 AC123738.2-201ENSMUST00000223791 1899 ntBASIC7.94□□□□□ -1.14
Cystm1Q8K353 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Cystm1Q8K353 Gm37613-201ENSMUST00000195677 3580 ntBASIC7.94□□□□□ -1.14
Cystm1Q8K353 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC7.94□□□□□ -1.14
Cystm1Q8K353 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Cystm1Q8K353 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Cystm1Q8K353 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Cystm1Q8K353 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Cystm1Q8K353 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Cystm1Q8K353 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Cystm1Q8K353 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC7.93□□□□□ -1.14
Cystm1Q8K353 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
Cystm1Q8K353 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Cystm1Q8K353 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC7.93□□□□□ -1.14
Cystm1Q8K353 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Cystm1Q8K353 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Cystm1Q8K353 CT009713.5-203ENSMUST00000224218 2079 ntBASIC7.93□□□□□ -1.14
Cystm1Q8K353 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Cystm1Q8K353 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Cystm1Q8K353 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Cystm1Q8K353 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Cystm1Q8K353 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Cystm1Q8K353 Gm6124-201ENSMUST00000188240 2580 ntBASIC7.93□□□□□ -1.14
Cystm1Q8K353 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Cystm1Q8K353 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
Cystm1Q8K353 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
Cystm1Q8K353 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Cystm1Q8K353 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Cystm1Q8K353 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Cystm1Q8K353 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Cystm1Q8K353 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Cystm1Q8K353 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Cystm1Q8K353 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC7.93□□□□□ -1.14
Cystm1Q8K353 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC7.93□□□□□ -1.14
Cystm1Q8K353 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC7.93□□□□□ -1.14
Cystm1Q8K353 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC7.93□□□□□ -1.14
Cystm1Q8K353 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Cystm1Q8K353 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC7.93□□□□□ -1.14
Cystm1Q8K353 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC7.93□□□□□ -1.14
Cystm1Q8K353 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Cystm1Q8K353 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Cystm1Q8K353 Gm6283-201ENSMUST00000182369 1000 ntBASIC7.93□□□□□ -1.14
Cystm1Q8K353 Gm10766-202ENSMUST00000194123 606 ntBASIC7.93□□□□□ -1.14
Cystm1Q8K353 AL593843.1-201ENSMUST00000195891 145 ntBASIC7.93□□□□□ -1.14
Cystm1Q8K353 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC7.93□□□□□ -1.14
Cystm1Q8K353 Gm9794-201ENSMUST00000202370 423 ntBASIC7.93□□□□□ -1.14
Cystm1Q8K353 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Cystm1Q8K353 Gm6916-202ENSMUST00000205523 195 ntBASIC7.93□□□□□ -1.14
Cystm1Q8K353 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC7.93□□□□□ -1.14
Cystm1Q8K353 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Cystm1Q8K353 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Cystm1Q8K353 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Cystm1Q8K353 Gm6263-201ENSMUST00000120029 1342 ntBASIC7.93□□□□□ -1.14
Cystm1Q8K353 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC7.93□□□□□ -1.14
Cystm1Q8K353 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Cystm1Q8K353 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Cystm1Q8K353 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
Cystm1Q8K353 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms