Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.22□□□□□ -0.13
Syne4Q8CII8 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Syne4Q8CII8 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Syne4Q8CII8 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.22□□□□□ -0.13
Syne4Q8CII8 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Syne4Q8CII8 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Syne4Q8CII8 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Syne4Q8CII8 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Syne4Q8CII8 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Syne4Q8CII8 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syne4Q8CII8 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syne4Q8CII8 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Syne4Q8CII8 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syne4Q8CII8 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.21□□□□□ -0.13
Syne4Q8CII8 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.21□□□□□ -0.13
Syne4Q8CII8 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syne4Q8CII8 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syne4Q8CII8 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syne4Q8CII8 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syne4Q8CII8 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Syne4Q8CII8 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC14.21□□□□□ -0.13
Syne4Q8CII8 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Syne4Q8CII8 Gm24934-201ENSMUST00000103764 111 ntBASIC14.21□□□□□ -0.13
Syne4Q8CII8 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Syne4Q8CII8 Gm13394-201ENSMUST00000121658 1000 ntBASIC14.21□□□□□ -0.13
Syne4Q8CII8 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC14.21□□□□□ -0.13
Syne4Q8CII8 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Syne4Q8CII8 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC14.21□□□□□ -0.13
Syne4Q8CII8 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Syne4Q8CII8 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Syne4Q8CII8 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC14.21□□□□□ -0.13
Syne4Q8CII8 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Syne4Q8CII8 Ighv4-2-201ENSMUST00000192975 362 ntBASIC14.21□□□□□ -0.13
Syne4Q8CII8 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Syne4Q8CII8 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC14.21□□□□□ -0.13
Syne4Q8CII8 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Syne4Q8CII8 Gm6905-201ENSMUST00000205729 511 ntBASIC14.21□□□□□ -0.13
Syne4Q8CII8 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC14.21□□□□□ -0.13
Syne4Q8CII8 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Syne4Q8CII8 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Syne4Q8CII8 AC138604.1-201ENSMUST00000226969 739 ntBASIC14.21□□□□□ -0.13
Syne4Q8CII8 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syne4Q8CII8 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syne4Q8CII8 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Syne4Q8CII8 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syne4Q8CII8 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Syne4Q8CII8 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC14.21□□□□□ -0.13
Syne4Q8CII8 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.21□□□□□ -0.13
Syne4Q8CII8 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Syne4Q8CII8 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Syne4Q8CII8 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Syne4Q8CII8 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Syne4Q8CII8 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC14.21□□□□□ -0.14
Syne4Q8CII8 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Syne4Q8CII8 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syne4Q8CII8 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Syne4Q8CII8 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Syne4Q8CII8 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syne4Q8CII8 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syne4Q8CII8 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Syne4Q8CII8 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Syne4Q8CII8 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syne4Q8CII8 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC14.2□□□□□ -0.14
Syne4Q8CII8 Gm24891-201ENSMUST00000104391 136 ntBASIC14.2□□□□□ -0.14
Syne4Q8CII8 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Syne4Q8CII8 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC14.2□□□□□ -0.14
Syne4Q8CII8 Gm807-202ENSMUST00000224929 408 ntBASIC14.2□□□□□ -0.14
Syne4Q8CII8 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syne4Q8CII8 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syne4Q8CII8 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Syne4Q8CII8 Gm26448-201ENSMUST00000082446 203 ntBASIC14.2□□□□□ -0.14
Syne4Q8CII8 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Syne4Q8CII8 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Syne4Q8CII8 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC14.2□□□□□ -0.14
Syne4Q8CII8 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Syne4Q8CII8 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Syne4Q8CII8 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syne4Q8CII8 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC14.2□□□□□ -0.14
Syne4Q8CII8 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syne4Q8CII8 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syne4Q8CII8 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.2□□□□□ -0.14
Syne4Q8CII8 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC14.2□□□□□ -0.14
Syne4Q8CII8 Gm45342-201ENSMUST00000210903 1363 ntBASIC14.2□□□□□ -0.14
Syne4Q8CII8 Gm9129-201ENSMUST00000218173 1689 ntBASIC14.2□□□□□ -0.14
Syne4Q8CII8 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Syne4Q8CII8 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Syne4Q8CII8 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syne4Q8CII8 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Syne4Q8CII8 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Syne4Q8CII8 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Syne4Q8CII8 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Syne4Q8CII8 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Syne4Q8CII8 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syne4Q8CII8 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syne4Q8CII8 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syne4Q8CII8 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Syne4Q8CII8 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC14.19□□□□□ -0.14
Syne4Q8CII8 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syne4Q8CII8 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syne4Q8CII8 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms