Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.9□□□□□ -0.34
CopaQ8CIE6 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CopaQ8CIE6 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CopaQ8CIE6 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CopaQ8CIE6 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CopaQ8CIE6 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.9□□□□□ -0.34
CopaQ8CIE6 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CopaQ8CIE6 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
CopaQ8CIE6 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.9□□□□□ -0.34
CopaQ8CIE6 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CopaQ8CIE6 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CopaQ8CIE6 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.9□□□□□ -0.34
CopaQ8CIE6 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CopaQ8CIE6 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.9□□□□□ -0.34
CopaQ8CIE6 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CopaQ8CIE6 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CopaQ8CIE6 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CopaQ8CIE6 Gm11591-201ENSMUST00000120063 702 ntBASIC12.9□□□□□ -0.34
CopaQ8CIE6 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.9□□□□□ -0.34
CopaQ8CIE6 Gm43822-201ENSMUST00000200285 476 ntBASIC12.9□□□□□ -0.34
CopaQ8CIE6 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.9□□□□□ -0.34
CopaQ8CIE6 Olfr284-202ENSMUST00000206647 966 ntBASIC12.9□□□□□ -0.34
CopaQ8CIE6 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CopaQ8CIE6 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CopaQ8CIE6 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.9□□□□□ -0.34
CopaQ8CIE6 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CopaQ8CIE6 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CopaQ8CIE6 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CopaQ8CIE6 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CopaQ8CIE6 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CopaQ8CIE6 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.9□□□□□ -0.34
CopaQ8CIE6 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.9□□□□□ -0.34
CopaQ8CIE6 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CopaQ8CIE6 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
CopaQ8CIE6 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.9□□□□□ -0.35
CopaQ8CIE6 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.9□□□□□ -0.35
CopaQ8CIE6 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
CopaQ8CIE6 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.9□□□□□ -0.35
CopaQ8CIE6 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
CopaQ8CIE6 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CopaQ8CIE6 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CopaQ8CIE6 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.89□□□□□ -0.35
CopaQ8CIE6 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CopaQ8CIE6 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CopaQ8CIE6 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CopaQ8CIE6 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.89□□□□□ -0.35
CopaQ8CIE6 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CopaQ8CIE6 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CopaQ8CIE6 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CopaQ8CIE6 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CopaQ8CIE6 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.89□□□□□ -0.35
CopaQ8CIE6 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CopaQ8CIE6 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CopaQ8CIE6 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
CopaQ8CIE6 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CopaQ8CIE6 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.89□□□□□ -0.35
CopaQ8CIE6 Gm28693-202ENSMUST00000190758 331 ntBASIC12.89□□□□□ -0.35
CopaQ8CIE6 Gm38266-201ENSMUST00000194931 421 ntBASIC12.89□□□□□ -0.35
CopaQ8CIE6 Gm3961-201ENSMUST00000204425 994 ntBASIC12.89□□□□□ -0.35
CopaQ8CIE6 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.89□□□□□ -0.35
CopaQ8CIE6 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CopaQ8CIE6 Gm18935-201ENSMUST00000212692 664 ntBASIC12.89□□□□□ -0.35
CopaQ8CIE6 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.89□□□□□ -0.35
CopaQ8CIE6 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.89□□□□□ -0.35
CopaQ8CIE6 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
CopaQ8CIE6 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CopaQ8CIE6 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CopaQ8CIE6 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CopaQ8CIE6 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.89□□□□□ -0.35
CopaQ8CIE6 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CopaQ8CIE6 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CopaQ8CIE6 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CopaQ8CIE6 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CopaQ8CIE6 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CopaQ8CIE6 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.89□□□□□ -0.35
CopaQ8CIE6 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CopaQ8CIE6 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CopaQ8CIE6 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CopaQ8CIE6 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CopaQ8CIE6 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CopaQ8CIE6 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CopaQ8CIE6 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CopaQ8CIE6 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CopaQ8CIE6 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CopaQ8CIE6 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CopaQ8CIE6 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CopaQ8CIE6 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CopaQ8CIE6 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CopaQ8CIE6 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CopaQ8CIE6 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CopaQ8CIE6 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CopaQ8CIE6 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CopaQ8CIE6 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CopaQ8CIE6 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CopaQ8CIE6 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.88□□□□□ -0.35
CopaQ8CIE6 Gm12363-201ENSMUST00000122250 668 ntBASIC12.88□□□□□ -0.35
CopaQ8CIE6 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.88□□□□□ -0.35
CopaQ8CIE6 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.88□□□□□ -0.35
CopaQ8CIE6 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.88□□□□□ -0.35
CopaQ8CIE6 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms