Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ShfQ8CG80 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
ShfQ8CG80 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
ShfQ8CG80 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ShfQ8CG80 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
ShfQ8CG80 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ShfQ8CG80 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
ShfQ8CG80 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
ShfQ8CG80 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ShfQ8CG80 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
ShfQ8CG80 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ShfQ8CG80 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.23□□□□□ -0.61
ShfQ8CG80 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.23□□□□□ -0.61
ShfQ8CG80 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
ShfQ8CG80 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
ShfQ8CG80 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.23□□□□□ -0.61
ShfQ8CG80 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ShfQ8CG80 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
ShfQ8CG80 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ShfQ8CG80 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
ShfQ8CG80 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ShfQ8CG80 Gm5866-201ENSMUST00000177881 973 ntBASIC11.23□□□□□ -0.61
ShfQ8CG80 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
ShfQ8CG80 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.23□□□□□ -0.61
ShfQ8CG80 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.23□□□□□ -0.61
ShfQ8CG80 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
ShfQ8CG80 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.23□□□□□ -0.61
ShfQ8CG80 Gm4768-201ENSMUST00000206199 686 ntBASIC11.23□□□□□ -0.61
ShfQ8CG80 Gm32025-201ENSMUST00000217960 307 ntBASIC11.23□□□□□ -0.61
ShfQ8CG80 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.23□□□□□ -0.61
ShfQ8CG80 Gm10012-201ENSMUST00000078252 192 ntBASIC11.23□□□□□ -0.61
ShfQ8CG80 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ShfQ8CG80 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ShfQ8CG80 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ShfQ8CG80 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.23□□□□□ -0.61
ShfQ8CG80 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ShfQ8CG80 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.23□□□□□ -0.61
ShfQ8CG80 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
ShfQ8CG80 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
ShfQ8CG80 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.23□□□□□ -0.61
ShfQ8CG80 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ShfQ8CG80 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
ShfQ8CG80 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.22□□□□□ -0.61
ShfQ8CG80 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
ShfQ8CG80 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ShfQ8CG80 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
ShfQ8CG80 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
ShfQ8CG80 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ShfQ8CG80 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ShfQ8CG80 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ShfQ8CG80 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.22□□□□□ -0.61
ShfQ8CG80 Gm13369-201ENSMUST00000119442 987 ntBASIC11.22□□□□□ -0.61
ShfQ8CG80 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
ShfQ8CG80 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
ShfQ8CG80 Rmrp-201ENSMUST00000157463 271 ntBASIC11.22□□□□□ -0.61
ShfQ8CG80 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.22□□□□□ -0.61
ShfQ8CG80 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
ShfQ8CG80 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
ShfQ8CG80 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
ShfQ8CG80 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
ShfQ8CG80 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.22□□□□□ -0.61
ShfQ8CG80 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.22□□□□□ -0.61
ShfQ8CG80 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ShfQ8CG80 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.22□□□□□ -0.61
ShfQ8CG80 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.22□□□□□ -0.61
ShfQ8CG80 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC11.22□□□□□ -0.61
ShfQ8CG80 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
ShfQ8CG80 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.22□□□□□ -0.61
ShfQ8CG80 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
ShfQ8CG80 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
ShfQ8CG80 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ShfQ8CG80 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ShfQ8CG80 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ShfQ8CG80 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ShfQ8CG80 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ShfQ8CG80 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ShfQ8CG80 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ShfQ8CG80 Gm10146-201ENSMUST00000072739 309 ntBASIC11.22□□□□□ -0.61
ShfQ8CG80 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
ShfQ8CG80 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.22□□□□□ -0.61
ShfQ8CG80 Gm24136-201ENSMUST00000083374 165 ntBASIC11.22□□□□□ -0.61
ShfQ8CG80 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
ShfQ8CG80 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
ShfQ8CG80 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
ShfQ8CG80 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
ShfQ8CG80 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
ShfQ8CG80 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
ShfQ8CG80 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
ShfQ8CG80 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
ShfQ8CG80 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.22□□□□□ -0.61
ShfQ8CG80 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
ShfQ8CG80 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.22□□□□□ -0.61
ShfQ8CG80 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.22□□□□□ -0.61
ShfQ8CG80 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
ShfQ8CG80 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
ShfQ8CG80 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.21□□□□□ -0.61
ShfQ8CG80 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
ShfQ8CG80 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.21□□□□□ -0.61
ShfQ8CG80 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
ShfQ8CG80 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 112.6 ms