Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc38Q8CDN8 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc38Q8CDN8 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc38Q8CDN8 Zfp125-201ENSMUST00000079237 2488 ntBASIC14.06□□□□□ -0.16
Ccdc38Q8CDN8 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc38Q8CDN8 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc38Q8CDN8 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC14.06□□□□□ -0.16
Ccdc38Q8CDN8 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14.06□□□□□ -0.16
Ccdc38Q8CDN8 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc38Q8CDN8 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc38Q8CDN8 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc38Q8CDN8 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc38Q8CDN8 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc38Q8CDN8 Gm6992-201ENSMUST00000217973 1607 ntBASIC14.05□□□□□ -0.16
Ccdc38Q8CDN8 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc38Q8CDN8 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc38Q8CDN8 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc38Q8CDN8 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc38Q8CDN8 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc38Q8CDN8 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc38Q8CDN8 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc38Q8CDN8 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc38Q8CDN8 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc38Q8CDN8 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc38Q8CDN8 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ccdc38Q8CDN8 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc38Q8CDN8 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.05□□□□□ -0.16
Ccdc38Q8CDN8 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccdc38Q8CDN8 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.05□□□□□ -0.16
Ccdc38Q8CDN8 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.05□□□□□ -0.16
Ccdc38Q8CDN8 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc38Q8CDN8 Gm7029-201ENSMUST00000173226 450 ntBASIC14.05□□□□□ -0.16
Ccdc38Q8CDN8 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccdc38Q8CDN8 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccdc38Q8CDN8 Gm19163-201ENSMUST00000223313 780 ntBASIC14.05□□□□□ -0.16
Ccdc38Q8CDN8 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccdc38Q8CDN8 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc38Q8CDN8 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc38Q8CDN8 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc38Q8CDN8 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc38Q8CDN8 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.05□□□□□ -0.16
Ccdc38Q8CDN8 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc38Q8CDN8 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc38Q8CDN8 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc38Q8CDN8 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC14.05□□□□□ -0.16
Ccdc38Q8CDN8 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc38Q8CDN8 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccdc38Q8CDN8 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc38Q8CDN8 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc38Q8CDN8 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc38Q8CDN8 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc38Q8CDN8 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc38Q8CDN8 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc38Q8CDN8 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc38Q8CDN8 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc38Q8CDN8 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc38Q8CDN8 AC129336.1-201ENSMUST00000220224 2277 ntBASIC14.04□□□□□ -0.16
Ccdc38Q8CDN8 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc38Q8CDN8 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc38Q8CDN8 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc38Q8CDN8 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc38Q8CDN8 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc38Q8CDN8 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc38Q8CDN8 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc38Q8CDN8 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc38Q8CDN8 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc38Q8CDN8 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ccdc38Q8CDN8 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Ccdc38Q8CDN8 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc38Q8CDN8 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc38Q8CDN8 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc38Q8CDN8 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc38Q8CDN8 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC14.04□□□□□ -0.16
Ccdc38Q8CDN8 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc38Q8CDN8 Gm27847-201ENSMUST00000183711 107 ntBASIC14.04□□□□□ -0.16
Ccdc38Q8CDN8 Gm27375-201ENSMUST00000183799 107 ntBASIC14.04□□□□□ -0.16
Ccdc38Q8CDN8 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.04□□□□□ -0.16
Ccdc38Q8CDN8 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc38Q8CDN8 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc38Q8CDN8 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc38Q8CDN8 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc38Q8CDN8 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.04□□□□□ -0.16
Ccdc38Q8CDN8 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc38Q8CDN8 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc38Q8CDN8 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc38Q8CDN8 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.04□□□□□ -0.16
Ccdc38Q8CDN8 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc38Q8CDN8 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc38Q8CDN8 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc38Q8CDN8 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc38Q8CDN8 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc38Q8CDN8 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc38Q8CDN8 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc38Q8CDN8 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc38Q8CDN8 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc38Q8CDN8 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc38Q8CDN8 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc38Q8CDN8 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc38Q8CDN8 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC14.03□□□□□ -0.16
Ccdc38Q8CDN8 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms