Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trerf1Q8BXJ2 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trerf1Q8BXJ2 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trerf1Q8BXJ2 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.38□□□□□ -0.27
Trerf1Q8BXJ2 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trerf1Q8BXJ2 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.38□□□□□ -0.27
Trerf1Q8BXJ2 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trerf1Q8BXJ2 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Trerf1Q8BXJ2 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trerf1Q8BXJ2 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trerf1Q8BXJ2 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.38□□□□□ -0.27
Trerf1Q8BXJ2 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trerf1Q8BXJ2 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trerf1Q8BXJ2 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trerf1Q8BXJ2 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trerf1Q8BXJ2 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trerf1Q8BXJ2 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 AC131586.1-201ENSMUST00000228844 2964 ntBASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 Gm11618-201ENSMUST00000117946 267 ntBASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 Gm12203-201ENSMUST00000118235 598 ntBASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 Gm13369-201ENSMUST00000119442 987 ntBASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 Gm12209-201ENSMUST00000120089 596 ntBASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 Gm45784-201ENSMUST00000188360 142 ntBASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trerf1Q8BXJ2 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trerf1Q8BXJ2 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trerf1Q8BXJ2 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trerf1Q8BXJ2 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Trerf1Q8BXJ2 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trerf1Q8BXJ2 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trerf1Q8BXJ2 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trerf1Q8BXJ2 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.36□□□□□ -0.27
Trerf1Q8BXJ2 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.36□□□□□ -0.27
Trerf1Q8BXJ2 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trerf1Q8BXJ2 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trerf1Q8BXJ2 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trerf1Q8BXJ2 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC13.36□□□□□ -0.27
Trerf1Q8BXJ2 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trerf1Q8BXJ2 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trerf1Q8BXJ2 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trerf1Q8BXJ2 Gm8805-201ENSMUST00000117848 313 ntBASIC13.36□□□□□ -0.27
Trerf1Q8BXJ2 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.36□□□□□ -0.27
Trerf1Q8BXJ2 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trerf1Q8BXJ2 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trerf1Q8BXJ2 AY702102-202ENSMUST00000194651 1173 ntBASIC13.36□□□□□ -0.27
Trerf1Q8BXJ2 Gm43438-201ENSMUST00000198133 379 ntBASIC13.36□□□□□ -0.27
Trerf1Q8BXJ2 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.36□□□□□ -0.27
Trerf1Q8BXJ2 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.36□□□□□ -0.27
Trerf1Q8BXJ2 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.36□□□□□ -0.27
Trerf1Q8BXJ2 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trerf1Q8BXJ2 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trerf1Q8BXJ2 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trerf1Q8BXJ2 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trerf1Q8BXJ2 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.36□□□□□ -0.27
Trerf1Q8BXJ2 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trerf1Q8BXJ2 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trerf1Q8BXJ2 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trerf1Q8BXJ2 Gm10548-201ENSMUST00000097631 2629 ntBASIC13.36□□□□□ -0.27
Trerf1Q8BXJ2 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trerf1Q8BXJ2 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 677.4 ms