Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup54Q8BTS4 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Nup54Q8BTS4 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup54Q8BTS4 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Nup54Q8BTS4 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nup54Q8BTS4 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup54Q8BTS4 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup54Q8BTS4 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup54Q8BTS4 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup54Q8BTS4 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup54Q8BTS4 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nup54Q8BTS4 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nup54Q8BTS4 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup54Q8BTS4 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup54Q8BTS4 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup54Q8BTS4 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup54Q8BTS4 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nup54Q8BTS4 Gm24255-201ENSMUST00000104481 128 ntBASIC12.9□□□□□ -0.34
Nup54Q8BTS4 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.9□□□□□ -0.34
Nup54Q8BTS4 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup54Q8BTS4 Gm14726-201ENSMUST00000120623 896 ntBASIC12.9□□□□□ -0.34
Nup54Q8BTS4 Gm14999-201ENSMUST00000121039 624 ntBASIC12.9□□□□□ -0.34
Nup54Q8BTS4 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup54Q8BTS4 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.9□□□□□ -0.34
Nup54Q8BTS4 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nup54Q8BTS4 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nup54Q8BTS4 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Nup54Q8BTS4 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.9□□□□□ -0.34
Nup54Q8BTS4 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Nup54Q8BTS4 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.9□□□□□ -0.34
Nup54Q8BTS4 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup54Q8BTS4 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.9□□□□□ -0.34
Nup54Q8BTS4 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup54Q8BTS4 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Nup54Q8BTS4 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup54Q8BTS4 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup54Q8BTS4 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nup54Q8BTS4 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Nup54Q8BTS4 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup54Q8BTS4 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup54Q8BTS4 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup54Q8BTS4 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup54Q8BTS4 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup54Q8BTS4 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
Nup54Q8BTS4 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Nup54Q8BTS4 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.35
Nup54Q8BTS4 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
Nup54Q8BTS4 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Nup54Q8BTS4 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup54Q8BTS4 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup54Q8BTS4 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Nup54Q8BTS4 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup54Q8BTS4 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.89□□□□□ -0.35
Nup54Q8BTS4 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup54Q8BTS4 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Nup54Q8BTS4 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nup54Q8BTS4 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup54Q8BTS4 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.89□□□□□ -0.35
Nup54Q8BTS4 Gm13570-201ENSMUST00000140763 309 ntBASIC12.89□□□□□ -0.35
Nup54Q8BTS4 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nup54Q8BTS4 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nup54Q8BTS4 Gm18304-201ENSMUST00000189162 546 ntBASIC12.89□□□□□ -0.35
Nup54Q8BTS4 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup54Q8BTS4 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup54Q8BTS4 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.89□□□□□ -0.35
Nup54Q8BTS4 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup54Q8BTS4 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup54Q8BTS4 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Nup54Q8BTS4 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nup54Q8BTS4 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nup54Q8BTS4 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.89□□□□□ -0.35
Nup54Q8BTS4 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Nup54Q8BTS4 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Nup54Q8BTS4 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup54Q8BTS4 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup54Q8BTS4 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Nup54Q8BTS4 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup54Q8BTS4 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup54Q8BTS4 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup54Q8BTS4 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nup54Q8BTS4 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nup54Q8BTS4 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.88□□□□□ -0.35
Nup54Q8BTS4 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.88□□□□□ -0.35
Nup54Q8BTS4 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup54Q8BTS4 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.88□□□□□ -0.35
Nup54Q8BTS4 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Nup54Q8BTS4 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Nup54Q8BTS4 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nup54Q8BTS4 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup54Q8BTS4 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Nup54Q8BTS4 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup54Q8BTS4 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nup54Q8BTS4 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.88□□□□□ -0.35
Nup54Q8BTS4 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.88□□□□□ -0.35
Nup54Q8BTS4 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup54Q8BTS4 Gm22323-201ENSMUST00000103832 109 ntBASIC12.88□□□□□ -0.35
Nup54Q8BTS4 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup54Q8BTS4 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nup54Q8BTS4 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nup54Q8BTS4 Gm7584-201ENSMUST00000175829 940 ntBASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms