Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rd3Q8BRE0 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rd3Q8BRE0 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rd3Q8BRE0 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rd3Q8BRE0 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rd3Q8BRE0 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rd3Q8BRE0 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rd3Q8BRE0 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rd3Q8BRE0 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.37□□□□□ -0.27
Rd3Q8BRE0 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rd3Q8BRE0 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC13.37□□□□□ -0.27
Rd3Q8BRE0 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Rd3Q8BRE0 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rd3Q8BRE0 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Rd3Q8BRE0 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Rd3Q8BRE0 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rd3Q8BRE0 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rd3Q8BRE0 Gm13996-201ENSMUST00000118456 430 ntBASIC13.37□□□□□ -0.27
Rd3Q8BRE0 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rd3Q8BRE0 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.37□□□□□ -0.27
Rd3Q8BRE0 Gm28882-201ENSMUST00000185504 314 ntBASIC13.37□□□□□ -0.27
Rd3Q8BRE0 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.37□□□□□ -0.27
Rd3Q8BRE0 Gm42997-202ENSMUST00000200321 985 ntBASIC13.37□□□□□ -0.27
Rd3Q8BRE0 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.37□□□□□ -0.27
Rd3Q8BRE0 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC13.37□□□□□ -0.27
Rd3Q8BRE0 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Rd3Q8BRE0 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC13.37□□□□□ -0.27
Rd3Q8BRE0 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rd3Q8BRE0 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Rd3Q8BRE0 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Rd3Q8BRE0 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.37□□□□□ -0.27
Rd3Q8BRE0 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rd3Q8BRE0 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rd3Q8BRE0 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rd3Q8BRE0 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rd3Q8BRE0 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rd3Q8BRE0 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rd3Q8BRE0 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Rd3Q8BRE0 Matn2-206ENSMUST00000228570 2798 ntBASIC13.37□□□□□ -0.27
Rd3Q8BRE0 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Rd3Q8BRE0 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rd3Q8BRE0 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rd3Q8BRE0 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rd3Q8BRE0 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rd3Q8BRE0 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rd3Q8BRE0 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rd3Q8BRE0 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rd3Q8BRE0 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rd3Q8BRE0 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC13.36□□□□□ -0.27
Rd3Q8BRE0 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rd3Q8BRE0 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Rd3Q8BRE0 Gm13315-201ENSMUST00000120376 991 ntBASIC13.36□□□□□ -0.27
Rd3Q8BRE0 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rd3Q8BRE0 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rd3Q8BRE0 Gm24845-201ENSMUST00000158034 109 ntBASIC13.36□□□□□ -0.27
Rd3Q8BRE0 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Rd3Q8BRE0 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Rd3Q8BRE0 Rprl1-202ENSMUST00000198476 238 ntBASIC13.36□□□□□ -0.27
Rd3Q8BRE0 Gm45433-201ENSMUST00000209386 247 ntBASIC13.36□□□□□ -0.27
Rd3Q8BRE0 Gm8913-201ENSMUST00000209491 641 ntBASIC13.36□□□□□ -0.27
Rd3Q8BRE0 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.36□□□□□ -0.27
Rd3Q8BRE0 Gm39404-201ENSMUST00000216350 313 ntBASIC13.36□□□□□ -0.27
Rd3Q8BRE0 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.36□□□□□ -0.27
Rd3Q8BRE0 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rd3Q8BRE0 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rd3Q8BRE0 Gm10076-201ENSMUST00000073238 384 ntBASIC13.36□□□□□ -0.27
Rd3Q8BRE0 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC13.36□□□□□ -0.27
Rd3Q8BRE0 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.36□□□□□ -0.27
Rd3Q8BRE0 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rd3Q8BRE0 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rd3Q8BRE0 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Rd3Q8BRE0 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rd3Q8BRE0 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rd3Q8BRE0 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rd3Q8BRE0 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.36□□□□□ -0.27
Rd3Q8BRE0 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rd3Q8BRE0 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rd3Q8BRE0 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rd3Q8BRE0 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rd3Q8BRE0 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rd3Q8BRE0 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rd3Q8BRE0 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rd3Q8BRE0 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rd3Q8BRE0 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rd3Q8BRE0 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Rd3Q8BRE0 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rd3Q8BRE0 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rd3Q8BRE0 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rd3Q8BRE0 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rd3Q8BRE0 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rd3Q8BRE0 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rd3Q8BRE0 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rd3Q8BRE0 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rd3Q8BRE0 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.35□□□□□ -0.27
Rd3Q8BRE0 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC13.35□□□□□ -0.27
Rd3Q8BRE0 Gm14832-201ENSMUST00000121289 322 ntBASIC13.35□□□□□ -0.27
Rd3Q8BRE0 Gm11597-201ENSMUST00000121423 964 ntBASIC13.35□□□□□ -0.27
Rd3Q8BRE0 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rd3Q8BRE0 Gm6963-201ENSMUST00000147879 379 ntBASIC13.35□□□□□ -0.27
Rd3Q8BRE0 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms